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Update docs/output.md

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Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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James A. Fellows Yates 2023-03-12 11:08:37 +01:00 committed by GitHub
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@ -218,7 +218,7 @@ It is used with nf-core/taxprofiler to allow removal of 'host' (e.g. human) or o
- `minimap2` - `minimap2`
- `build/` - `build/`
- `*.mmi2`: minimap2 indicies of reference genome, only if `--save_hostremoval_index` supplied. - `*.mmi2`: minimap2 indices of reference genome, only if `--save_hostremoval_index` supplied.
- `align/` - `align/`
- `<sample_id>.bam`: Alignment file in BAM format containing both mapped and unmapped reads. - `<sample_id>.bam`: Alignment file in BAM format containing both mapped and unmapped reads.