From 8745fc625c17ac39d6fdc54702164ad056a6cfed Mon Sep 17 00:00:00 2001 From: sofstam Date: Wed, 29 Mar 2023 15:36:20 +0200 Subject: [PATCH] Correct output file from samtools/fastq --- subworkflows/local/longread_hostremoval.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/subworkflows/local/longread_hostremoval.nf b/subworkflows/local/longread_hostremoval.nf index 7242bbd..ff62c30 100644 --- a/subworkflows/local/longread_hostremoval.nf +++ b/subworkflows/local/longread_hostremoval.nf @@ -54,7 +54,7 @@ workflow LONGREAD_HOSTREMOVAL { emit: stats = SAMTOOLS_STATS.out.stats //channel: [val(meta), [reads ] ] - reads = SAMTOOLS_FASTQ.out.fastq // channel: [ val(meta), [ reads ] ] + reads = SAMTOOLS_FASTQ.out.other // channel: [ val(meta), [ reads ] ] versions = ch_versions // channel: [ versions.yml ] mqc = ch_multiqc_files }