From 8d689141924a52cf72e666e76db1b575d541a341 Mon Sep 17 00:00:00 2001 From: James Fellows Yates Date: Tue, 12 Apr 2022 10:47:44 +0200 Subject: [PATCH] Re-add operator name --- subworkflows/local/profiling.nf | 1 + 1 file changed, 1 insertion(+) diff --git a/subworkflows/local/profiling.nf b/subworkflows/local/profiling.nf index b03b83e..8a156c2 100644 --- a/subworkflows/local/profiling.nf +++ b/subworkflows/local/profiling.nf @@ -23,6 +23,7 @@ workflow PROFILING { // e.g. output [DUMP: reads_plus_db] [['id':'2612', 'run_accession':'combined', 'instrument_platform':'ILLUMINA', 'single_end':1], /2612.merged.fastq.gz, ['tool':'malt', 'db_name':'mal95', 'db_params':'"-id 90"'], /malt90] ch_input_for_profiling = reads .combine(databases) + .map { meta, reads -> def meta_new = meta.clone() pairtype = meta_new['single_end'] ? '_se' : '_pe'