mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-13 07:43:08 +00:00
Fix mistake in previous upstream merge with AR2 output channel for settings file
This commit is contained in:
parent
4dbd0ddc73
commit
98f082d7b6
2 changed files with 4 additions and 3 deletions
|
@ -75,9 +75,10 @@ workflow SHORTREAD_ADAPTERREMOVAL {
|
|||
|
||||
ch_versions = ch_versions.mix( ADAPTERREMOVAL_SINGLE.out.versions.first() )
|
||||
ch_versions = ch_versions.mix( ADAPTERREMOVAL_PAIRED.out.versions.first() )
|
||||
|
||||
ch_multiqc_files = ch_multiqc_files.mix(
|
||||
ADAPTERREMOVAL_PAIRED.out.log,
|
||||
ADAPTERREMOVAL_SINGLE.out.log
|
||||
ADAPTERREMOVAL_PAIRED.out.settings,
|
||||
ADAPTERREMOVAL_SINGLE.out.settings
|
||||
)
|
||||
|
||||
emit:
|
||||
|
|
|
@ -222,7 +222,7 @@ workflow TAXPROFILER {
|
|||
}
|
||||
|
||||
if (params.shortread_complexityfilter){
|
||||
ch_multiqc_files = ch_multiqc_files.mix( SHORTREAD_COMPLEXITYFILTERING.out.mqc.collect{it[1]}.ifEmpty([]) )
|
||||
ch_multiqc_files = ch_multiqc_files.mix( SHORTREAD_COMPLEXITYFILTERING.out.mqc.collect{it[1]}.ifEmpty([]) )
|
||||
ch_versions = ch_versions.mix( SHORTREAD_COMPLEXITYFILTERING.out.versions )
|
||||
}
|
||||
|
||||
|
|
Loading…
Reference in a new issue