1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-22 07:09:56 +00:00

[skip ci] Update docs/usage.md

Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
This commit is contained in:
James A. Fellows Yates 2023-01-24 11:50:58 +01:00 committed by GitHub
parent 085d9e519c
commit 9cf2d8763f
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23

View file

@ -64,7 +64,7 @@ ERR3201952,ERR3201952,OXFORD_NANOPORE,/<path>/<to>/fastq/ERR3201952.fastq.gz,,
> ⚠️ Input FASTQ and FASTA files _must_ be gzipped > ⚠️ Input FASTQ and FASTA files _must_ be gzipped
> ⚠️ While one can include both short-read and long-read data in one run, we recommend that you split these across _two_ pipeline runs and database sheets (see below). This will allow classification optmisation for each data type, and make MultiQC run-reports more readable (due to run statististics having vary large number differences). > ⚠️ While one can include both short-read and long-read data in one run, we recommend that you split these across _two_ pipeline runs and database sheets (see below). This will allow classification optimisation for each data type, and make MultiQC run-reports more readable (due to run statistics having vary large number differences).
| Column | Description | | Column | Description |
| --------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | | --------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |