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Code Issues Releases Packages Activity

Remove the join

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This commit is contained in:
James Fellows Yates 2022-11-22 13:39:21 +01:00
parent 06659af777
commit a383c9ae40
1 changed files with 2 additions and 1 deletions
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3
modules/nf-core/krakenuniq/preloadedkrakenuniq/main.nf generated
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@ -45,7 +45,8 @@ process KRAKENUNIQ_PRELOADEDKRAKENUNIQ {
--preload $ram_chunk_size \\ --preload $ram_chunk_size \\
--threads $task.cpus --threads $task.cpus
for fastq in "${fastqs.join('\" \"')}"; do \\ # for fastq in "${fastqs.join('\" \"')}"; do \\
for fastq in ${fastqs}; do \\
PREFIX=\$(echo \$fastq) PREFIX=\$(echo \$fastq)
krakenuniq \\ krakenuniq \\
--db $db \\ --db $db \\