1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-09-21 02:52:04 +00:00
This commit is contained in:
sofstam 2023-03-23 17:05:34 +01:00
parent 85905127b8
commit a3d077fcbc

View file

@ -8,308 +8,222 @@
"adapterremoval": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"bbmap/bbduk": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"bowtie2/align": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"bowtie2/build": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"bracken/bracken": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"bracken/combinebrackenoutputs": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"cat/fastq": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"centrifuge/centrifuge": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"centrifuge/kreport": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"diamond/blastx": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"falco": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
],
"installed_by": ["modules"],
"patch": "modules/nf-core/falco/falco.diff"
},
"fastp": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"filtlong": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"gunzip": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"kaiju/kaiju": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"kaiju/kaiju2krona": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"kaiju/kaiju2table": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"kraken2/kraken2": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"krakentools/combinekreports": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"krakentools/kreport2krona": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"krakenuniq/preloadedkrakenuniq": {
"branch": "master",
"git_sha": "a6eb17f65b3ee5761c25c075a6166c9f76733cee",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"krona/ktimporttaxonomy": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"krona/ktimporttext": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"malt/run": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"megan/rma2info": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"metaphlan3/mergemetaphlantables": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"metaphlan3/metaphlan3": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"minimap2/align": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"minimap2/index": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"motus/merge": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"motus/profile": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "ee80d14721e76e2e079103b8dcd5d57129e584ba",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"porechop/porechop": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
],
"installed_by": ["modules"],
"patch": "modules/nf-core/porechop/porechop/porechop-porechop.diff"
},
"prinseqplusplus": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"samtools/bam2fq": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"samtools/fastq": {
"branch": "master",
"git_sha": "0f8a77ff00e65eaeebc509b8156eaa983192474b",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"samtools/stats": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"samtools/view": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"taxpasta/merge": {
"branch": "master",
"git_sha": "ffa9641ee18f88aff974257cb50ba3cf8f7d143c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
},
"untar": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": [
"modules"
]
"installed_by": ["modules"]
}
}
}
}
}
}
}