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Update taxprofiler.nf

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James A. Fellows Yates 2022-12-23 15:08:01 +01:00 committed by GitHub
parent e586747680
commit acba31a8d6
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workflows/taxprofiler.nf
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@ -15,7 +15,8 @@ def checkPathParamList = [ params.input, params.genome, params.databases,
params.outdir, params.longread_hostremoval_index, params.outdir, params.longread_hostremoval_index,
params.hostremoval_reference, params.shortread_hostremoval_index, params.hostremoval_reference, params.shortread_hostremoval_index,
params.multiqc_config, params.shortread_qc_adapterlist, params.multiqc_config, params.shortread_qc_adapterlist,
params.krona_taxonomy_directory params.krona_taxonomy_directory,
params.multiqc_logo, params.multiqc_methods_description
] ]
for (param in checkPathParamList) { if (param) { file(param, checkIfExists: true) } } for (param in checkPathParamList) { if (param) { file(param, checkIfExists: true) } }