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chore: configure output for metaphlan3

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This commit is contained in:
Moritz E. Beber 2022-04-02 14:44:27 +02:00
parent 95ed86516b
commit b0b5936fe8
1 changed files with 9 additions and 0 deletions
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9
conf/modules.config
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@ -170,6 +170,15 @@ process {
] ]
} }
withName: METAPHLAN3 {
publishDir = [
path: { "${params.outdir}/metaphlan3/${metaphlan_db.simpleName}" },
mode: params.publish_dir_mode,
pattern: '*.{biom,txt}'
]
ext.prefix = { "${meta.id}-${meta.run_accession}-${metaphlan_db.simpleName}" }
}
withName: CUSTOM_DUMPSOFTWAREVERSIONS { withName: CUSTOM_DUMPSOFTWAREVERSIONS {
publishDir = [ publishDir = [
path: { "${params.outdir}/pipeline_info" }, path: { "${params.outdir}/pipeline_info" },