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Merge pull request #26 from genomic-medicine-sweden/add_nanopore

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Perform fastqc on nanopore reads before trimming
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James A. Fellows Yates 2022-03-18 14:22:54 +01:00 committed by GitHub
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workflows/taxprofiler.nf
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@ -89,7 +89,7 @@ workflow TAXPROFILER {
// MODULE: Run FastQC // MODULE: Run FastQC
// //
FASTQC ( FASTQC (
INPUT_CHECK.out.fastq INPUT_CHECK.out.fastq.mix( INPUT_CHECK.out.nanopore )
) )
ch_versions = ch_versions.mix(FASTQC.out.versions.first()) ch_versions = ch_versions.mix(FASTQC.out.versions.first())