diff --git a/subworkflows/local/input_check.nf b/subworkflows/local/input_check.nf index 0db3592..5764b72 100644 --- a/subworkflows/local/input_check.nf +++ b/subworkflows/local/input_check.nf @@ -38,6 +38,7 @@ workflow INPUT_CHECK { def create_fastq_channel(LinkedHashMap row) { // create meta map def meta = row.subMap(['sample', 'run_accession', 'instrument_platform']) + meta.id = meta.sample meta.single_end = row.single_end.toBoolean() meta.is_fasta = false