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Try with retries from sarek approach

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This commit is contained in:
James Fellows Yates 2022-09-02 12:24:29 +02:00
parent 3a33d81e80
commit c3427e44b3
1 changed files with 4 additions and 5 deletions
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9
.github/workflows/ci.yml vendored
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@ -55,11 +55,10 @@ jobs:
sudo update-locale LANG=en_US.UTF-8
- name: Run pipeline with test data
# TODO nf-core: You can customise CI pipeline run tests as required
# For example: adding multiple test runs with different parameters
# Remember that you can parallelise this by using strategy.matrix
run: |
nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results ${{ matrix.parameters }}
uses: Wandalen/wretry.action@v1.0.11
with:
command: nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results ${{ matrix.parameters }}
attempt_limit: 3
motus:
name: Test mOTUs with workflow parameters