From c47b9e55fa85e75e39f992a8743c22db551c03c1 Mon Sep 17 00:00:00 2001 From: sofstam Date: Tue, 4 Apr 2023 18:01:02 +0200 Subject: [PATCH] Mix reads in emit --- subworkflows/local/longread_hostremoval.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/subworkflows/local/longread_hostremoval.nf b/subworkflows/local/longread_hostremoval.nf index ff62c30..f05e6a6 100644 --- a/subworkflows/local/longread_hostremoval.nf +++ b/subworkflows/local/longread_hostremoval.nf @@ -54,7 +54,7 @@ workflow LONGREAD_HOSTREMOVAL { emit: stats = SAMTOOLS_STATS.out.stats //channel: [val(meta), [reads ] ] - reads = SAMTOOLS_FASTQ.out.other // channel: [ val(meta), [ reads ] ] + reads = SAMTOOLS_FASTQ.out.fastq.mix( SAMTOOLS_FASTQ.out.other) // channel: [ val(meta), [ reads ] ] versions = ch_versions // channel: [ versions.yml ] mqc = ch_multiqc_files }