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Sofia Stamouli 2022-09-13 15:56:06 +02:00 committed by GitHub
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@ -410,3 +410,9 @@ We recommend adding the following line to your environment to limit this (typica
```bash
NXF_OPTS='-Xms1g -Xmx4g'
```
## Troubleshooting and FAQs
### I get a warning during centrifuge_kreport process when running taxprofiler on a minimal dataset.
When a sample has no hits, `centrifuge` classifier exits with exit code `255`. The pipeline does not fail and this is provided as a `WARN`.