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refactor: change Bracken prefix to be more specific

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This commit is contained in:
Moritz E. Beber 2022-10-19 16:20:09 +02:00
parent 8768a16d63
commit c7c7a7f678
1 changed files with 1 additions and 0 deletions
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conf/modules.config
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@ -288,6 +288,7 @@ process {
withName: BRACKEN_BRACKEN { withName: BRACKEN_BRACKEN {
errorStrategy = 'ignore' errorStrategy = 'ignore'
ext.prefix = params.perform_runmerging ? { "${meta.id}-${meta.db_name}" } : { "${meta.id}-${meta.run_accession}-${meta.db_name}" }
publishDir = [ publishDir = [
path: { "${params.outdir}/bracken/${meta.db_name}/" }, path: { "${params.outdir}/bracken/${meta.db_name}/" },
mode: params.publish_dir_mode, mode: params.publish_dir_mode,