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Resource optimisation
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cc7d219267
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1 changed files with 6 additions and 1 deletions
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@ -28,7 +28,7 @@ process {
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// See https://www.nextflow.io/docs/latest/config.html#config-process-selectors
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withLabel:process_single {
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cpus = { check_max( 1 , 'cpus' ) }
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memory = { check_max( 6.GB * task.attempt, 'memory' ) }
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memory = { check_max( 1.GB * task.attempt, 'memory' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:process_low {
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@ -62,4 +62,9 @@ process {
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withName:CUSTOM_DUMPSOFTWAREVERSIONS {
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cache = false
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}
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withName: RMA2INFO {
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cpus = { check_max( 1 , 'cpus' ) }
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memory = { check_max( 6.GB * task.attempt, 'memory' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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}
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