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Code Issues Releases Packages Activity

Update mOTUs to 3.0.3

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This commit is contained in:
James Fellows Yates 2022-12-12 15:42:01 +01:00
parent be85cb408c
commit e31e7d3172
5 changed files with 10 additions and 12 deletions
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4
modules.json
View file

@ -172,12 +172,12 @@
}, },
"motus/merge": { "motus/merge": {
"branch": "master", "branch": "master",
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905", "git_sha": "3fce766123e71e82fb384db7d07b59180baa9ee9",
"installed_by": ["modules"] "installed_by": ["modules"]
}, },
"motus/profile": { "motus/profile": {
"branch": "master", "branch": "master",
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905", "git_sha": "3fce766123e71e82fb384db7d07b59180baa9ee9",
"installed_by": ["modules"] "installed_by": ["modules"]
}, },
"multiqc": { "multiqc": {

8
modules/nf-core/motus/merge/main.nf generated
View file

@ -1,13 +1,11 @@
VERSION = '3.0.1'
process MOTUS_MERGE { process MOTUS_MERGE {
tag "$meta.id" tag "$meta.id"
label 'process_single' label 'process_single'
conda (params.enable_conda ? "bioconda::motus=3.0.1" : null) conda (params.enable_conda ? "bioconda::motus=3.0.3" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/motus:3.0.1--pyhdfd78af_0': 'https://depot.galaxyproject.org/singularity/motus:3.0.3--pyhdfd78af_0':
'quay.io/biocontainers/motus:3.0.1--pyhdfd78af_0' }" 'quay.io/biocontainers/motus:3.0.3--pyhdfd78af_0' }"
input: input:
tuple val(meta), path(input) tuple val(meta), path(input)

2
modules/nf-core/motus/merge/meta.yml generated
View file

@ -14,7 +14,7 @@ tools:
homepage: "https://motu-tool.org/" homepage: "https://motu-tool.org/"
documentation: "https://github.com/motu-tool/mOTUs/wiki" documentation: "https://github.com/motu-tool/mOTUs/wiki"
tool_dev_url: "https://github.com/motu-tool/mOTUs" tool_dev_url: "https://github.com/motu-tool/mOTUs"
doi: "10.1038/s41467-019-08844-4" doi: "10.1186/s40168-022-01410-z"
licence: "['GPL v3']" licence: "['GPL v3']"
input: input:

6
modules/nf-core/motus/profile/main.nf generated
View file

@ -2,10 +2,10 @@ process MOTUS_PROFILE {
tag "$meta.id" tag "$meta.id"
label 'process_medium' label 'process_medium'
conda (params.enable_conda ? "bioconda::motus=3.0.1" : null) conda (params.enable_conda ? "bioconda::motus=3.0.3" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/motus:3.0.1--pyhdfd78af_0': 'https://depot.galaxyproject.org/singularity/motus:3.0.3--pyhdfd78af_0':
'quay.io/biocontainers/motus:3.0.1--pyhdfd78af_0' }" 'quay.io/biocontainers/motus:3.0.3--pyhdfd78af_0' }"
input: input:
tuple val(meta), path(reads) tuple val(meta), path(reads)

2
modules/nf-core/motus/profile/meta.yml generated
View file

@ -11,7 +11,7 @@ tools:
homepage: "https://motu-tool.org/" homepage: "https://motu-tool.org/"
documentation: "https://github.com/motu-tool/mOTUs/wiki" documentation: "https://github.com/motu-tool/mOTUs/wiki"
tool_dev_url: "https://github.com/motu-tool/mOTUs" tool_dev_url: "https://github.com/motu-tool/mOTUs"
doi: "10.1038/s41467-019-08844-4" doi: "10.1186/s40168-022-01410-z"
licence: "['GPL v3']" licence: "['GPL v3']"
input: input: