diff --git a/workflows/taxprofiler.nf b/workflows/taxprofiler.nf index aa83a24..c00c609 100644 --- a/workflows/taxprofiler.nf +++ b/workflows/taxprofiler.nf @@ -12,7 +12,7 @@ WorkflowTaxprofiler.initialise(params, log) // TODO nf-core: Add all file path parameters for the pipeline to the list below // Check input path parameters to see if they exist def checkPathParamList = [ params.input, params.genome, params.databases, - params.outdir, params.longread_hostremoval_index + params.outdir, params.longread_hostremoval_index, params.hostremoval_reference, params.shortread_hostremoval_index, params.multiqc_config, params.shortread_qc_adapterlist, params.krona_taxonomy_directory