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More tweaks
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parent
ca9c0cf8fd
commit
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1 changed files with 4 additions and 2 deletions
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@ -339,6 +339,7 @@ process {
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mode: params.publish_dir_mode,
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enabled: params.perform_shortread_hostremoval,
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pattern: '*.fastq.gz',
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// Don't know why `!` doesn't work here, but `== false` makes it work...
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saveAs: { ( params.perform_runmerging == false || params.perform_runmerging && !meta.is_multirun ) && params.perform_shortread_hostremoval && params.save_analysis_ready_fastqs ? it : null }
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]
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]
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@ -381,9 +382,10 @@ process {
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[
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path: { "${params.outdir}/analysis_ready_fastqs" },
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mode: params.publish_dir_mode,
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pattern: '*.fastq.gz',
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pattern: '*.fq.gz',
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enabled: params.save_analysis_ready_fastqs,
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saveAs: { ( !params.perform_runmerging | params.perform_runmerging && !meta.is_multirun ) && params.perform_longread_hostremoval && params.save_analysis_ready_fastqs ? it : null }
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// Don't know why `!` doesn't work here, but `== false` makes it work...
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saveAs: { ( !params.perform_runmerging || params.perform_runmerging && !meta.is_multirun ) && params.perform_longread_hostremoval && params.save_analysis_ready_fastqs ? it : null }
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]
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]
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}
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