millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-10 23:03:10 +00:00
Code Issues Releases Packages Activity

Update modules/local/samplesheet_check.nf

Browse source 
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
This commit is contained in:
Rafal Stepien 2022-09-19 09:49:20 -04:00 committed by GitHub
parent 9349346864
commit e84b64f7e1
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 3 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

4
modules/local/samplesheet_check.nf
View file

@ -15,7 +15,9 @@ process SAMPLESHEET_CHECK {
script: // detect_reads.py script is bundled with the pipeline, in nf-core/taxprofiler/bin/
"""
python3 $projectDir/bin/detect_reads.py $samplesheet samplesheet_validated.csv
python3 $projectDir/bin/detect_reads.py \\
$samplesheet \\
samplesheet_validated.csv
cat <<-END_VERSIONS > versions.yml
"${task.process}":