Remove duplicate config and sync longread fastqc

conf/modules.config

@@ -90,16 +90,6 @@ process {
         ]
     }
 
-    withName: FASTQC_POST {
-        ext.args = '--quiet'
-        ext.prefix = { "${meta.id}_${meta.run_accession}_processed" }
-        publishDir = [
-            path: { "${params.outdir}/fastqc/processed" },
-            mode: 'copy',
-            pattern: '*.html'
-        ]
-    }
-
     withName: CAT_FASTQ {
         publishDir = [
             path: { "${params.outdir}/prepared_sequences" },

subworkflows/local/longread_preprocessing.nf

@@ -24,7 +24,7 @@ workflow LONGREAD_PREPROCESSING {
                                         [ meta_new, reads ]
                                     }
 
-    FASTQC_POST ( PORECHOP.out.reads )
+    FASTQC_PROCESSED ( PORECHOP.out.reads )
     ch_versions = ch_versions.mix(PORECHOP.out.versions.first())
     ch_multiqc_files = ch_multiqc_files.mix( FASTQC_PROCESSED.out.zip.collect{it[1]} )