|
|
|
@ -10,15 +10,15 @@ class WorkflowTaxprofiler {
|
|
|
|
|
//
|
|
|
|
|
// Check and validate parameters
|
|
|
|
|
//
|
|
|
|
|
/*
|
|
|
|
|
|
|
|
|
|
public static void initialise(params, log) {
|
|
|
|
|
genomeExistsError(params, log)
|
|
|
|
|
|
|
|
|
|
if (!params.fasta) {
|
|
|
|
|
Nextflow.error "Genome fasta file not specified with e.g. '--fasta genome.fa' or via a detectable config file."
|
|
|
|
|
}
|
|
|
|
|
//if (!params.fasta) {
|
|
|
|
|
// Nextflow.error "Genome fasta file not specified with e.g. '--fasta genome.fa' or via a detectable config file."
|
|
|
|
|
//}
|
|
|
|
|
}
|
|
|
|
|
*/
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
//
|
|
|
|
|
// Get workflow summary for MultiQC
|
|
|
|
|
//
|
|
|
|
|