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Update subworkflows/local/standardisation_profiles.nf

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Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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James A. Fellows Yates 2022-09-16 15:20:47 +02:00 committed by GitHub
parent cdb21d17b3
commit f43c54317c
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subworkflows/local/standardisation_profiles.nf
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@ -5,7 +5,7 @@
include { KAIJU_KAIJU2TABLE } from '../../modules/nf-core/modules/kaiju/kaiju2table/main' include { KAIJU_KAIJU2TABLE } from '../../modules/nf-core/modules/kaiju/kaiju2table/main'
include { KRAKENTOOLS_COMBINEKREPORTS } from '../../modules/nf-core/modules/krakentools/combinekreports/main' include { KRAKENTOOLS_COMBINEKREPORTS } from '../../modules/nf-core/modules/krakentools/combinekreports/main'
include { KRAKENTOOLS_COMBINEKREPORTS as KRAKENTOOLS_COMBINEKREPORTS_CENTRIFUGE } from '../../modules/nf-core/modules/krakentools/combinekreports/main' include { KRAKENTOOLS_COMBINEKREPORTS as KRAKENTOOLS_COMBINEKREPORTS_CENTRIFUGE } from '../../modules/nf-core/modules/krakentools/combinekreports/main'
include { METAPHLAN3_MERGEMETAPHLANTABLES } from '../../modules/nf-core/modules/metaphlan3/mergemetaphlantables/main' include { METAPHLAN3_MERGEMETAPHLANTABLES } from '../../modules/nf-core/modules/metaphlan3/mergemetaphlantables/main'
include { MOTUS_MERGE } from '../../modules/nf-core/modules/motus/merge/main' include { MOTUS_MERGE } from '../../modules/nf-core/modules/motus/merge/main'
workflow STANDARDISATION_PROFILES { workflow STANDARDISATION_PROFILES {