Rafal Stepien 768f9980d8 Add pep_input_base_dir to workflow. Just need to update modules		2022-09-15 12:31:49 -04:00
..
db_check.nf	remove the database auto-download for mOTUs.	2022-06-03 14:13:58 -04:00
input_check.nf	Add pep_input_base_dir to workflow. Just need to update modules	2022-09-15 12:31:49 -04:00
longread_hostremoval.nf	Implement hostremoval	2022-05-03 09:34:27 +02:00
longread_preprocessing.nf	Make longread quality ftilering opt out	2022-08-30 14:08:05 +02:00
profiling.nf	Merge branch 'dev' into module-update	2022-09-08 13:36:21 +02:00
shortread_adapterremoval.nf	Add initial longread QC filtering - requires filtlong module update	2022-05-01 07:18:14 +02:00
shortread_complexityfiltering.nf	Add FASTP complexity option	2022-05-07 06:09:05 +02:00
shortread_fastp.nf	Add initial longread QC filtering - requires filtlong module update	2022-05-01 07:18:14 +02:00
shortread_hostremoval.nf	Module update	2022-09-08 08:08:36 +02:00
shortread_preprocessing.nf	Add initial longread QC filtering - requires filtlong module update	2022-05-01 07:18:14 +02:00
standardisation_profiles.nf	Start work on more merging tools	2022-09-06 17:34:45 +02:00
visualization_krona.nf	Update subworkflows/local/visualization_krona.nf	2022-09-02 16:15:46 +02:00