mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-29 16:39:55 +00:00
41 lines
1.1 KiB
YAML
Generated
41 lines
1.1 KiB
YAML
Generated
name: "eido_validate"
|
|
description: Validate samplesheet or PEP config against a schema
|
|
keywords:
|
|
- eido
|
|
- validate
|
|
- schema
|
|
- format
|
|
- pep
|
|
tools:
|
|
- "validate":
|
|
description: "Validate samplesheet or PEP config against a schema."
|
|
homepage: "http://eido.databio.org/en/latest/"
|
|
documentation: "http://eido.databio.org/en/latest/"
|
|
doi: "10.1093/gigascience/giab077"
|
|
licence: "BSD-2-Clause"
|
|
|
|
input:
|
|
- samplesheet:
|
|
type: file
|
|
description: Samplesheet or PEP file to be validated
|
|
pattern: "*.{yaml,yml,csv}"
|
|
- schema:
|
|
type: file
|
|
description: Schema that the samplesheet will be validated against
|
|
pattern: "*.{yaml,yml}"
|
|
- pep_input_base_dir:
|
|
type: file
|
|
description: Optional path to the directory where files specified in a PEP config file are stored. Any paths specified in the config will need to be relative to this base directory.
|
|
|
|
output:
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- log:
|
|
type: file
|
|
description: File containing validation log.
|
|
pattern: "*.log"
|
|
|
|
authors:
|
|
- "@rafalstepien"
|