James A. Fellows Yates 2140928638 Merge pull request #272 from nf-core/final-reads-saving ... Add 'final reads for profiling' saving mechanism		2023-04-21 15:21:35 +02:00
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db_check.nf	Replace all instance of exit 1 with error for safety and consistency	2023-04-04 09:41:22 +00:00
input_check.nf	Merge pull request #272 from nf-core/final-reads-saving	2023-04-21 15:21:35 +02:00
longread_hostremoval.nf	Mix reads in emit	2023-04-04 18:01:02 +02:00
longread_preprocessing.nf	Update subworkflows/local/longread_preprocessing.nf	2023-03-11 11:28:42 +01:00
profiling.nf	Update docs based on feedback and add missing results directories	2023-03-12 08:35:45 +01:00
shortread_adapterremoval.nf	refactor: use shorter and more explicit syntax	2022-12-04 21:54:10 +01:00
shortread_complexityfiltering.nf	fix: adjust import paths to re-organization	2022-10-05 13:40:43 +02:00
shortread_fastp.nf	Addd FASTP adadapter list	2022-11-02 12:39:34 +01:00
shortread_hostremoval.nf	Fix exporting of mapped/unmapped reads for consistency across both short and long reads	2023-02-07 11:43:40 +01:00
shortread_preprocessing.nf	Addd FASTP adadapter list	2022-11-02 12:39:34 +01:00
standardisation_profiles.nf	chore: remove fixme comments	2023-03-11 11:28:42 +01:00
visualization_krona.nf	fix: adjust import paths to re-organization	2022-10-05 13:40:43 +02:00