mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-22 23:59:55 +00:00
55 lines
1.6 KiB
YAML
Generated
55 lines
1.6 KiB
YAML
Generated
name: MultiQC
|
|
description: Aggregate results from bioinformatics analyses across many samples into a single report
|
|
keywords:
|
|
- QC
|
|
- bioinformatics tools
|
|
- Beautiful stand-alone HTML report
|
|
tools:
|
|
- multiqc:
|
|
description: |
|
|
MultiQC searches a given directory for analysis logs and compiles a HTML report.
|
|
It's a general use tool, perfect for summarising the output from numerous bioinformatics tools.
|
|
homepage: https://multiqc.info/
|
|
documentation: https://multiqc.info/docs/
|
|
licence: ["GPL-3.0-or-later"]
|
|
|
|
input:
|
|
- multiqc_files:
|
|
type: file
|
|
description: |
|
|
List of reports / files recognised by MultiQC, for example the html and zip output of FastQC
|
|
- multiqc_config:
|
|
type: file
|
|
description: Optional config yml for MultiQC
|
|
pattern: "*.{yml,yaml}"
|
|
- extra_multiqc_config:
|
|
type: file
|
|
description: Second optional config yml for MultiQC. Will override common sections in multiqc_config.
|
|
pattern: "*.{yml,yaml}"
|
|
- multiqc_logo:
|
|
type: file
|
|
description: Optional logo file for MultiQC
|
|
pattern: "*.{png}"
|
|
|
|
output:
|
|
- report:
|
|
type: file
|
|
description: MultiQC report file
|
|
pattern: "multiqc_report.html"
|
|
- data:
|
|
type: dir
|
|
description: MultiQC data dir
|
|
pattern: "multiqc_data"
|
|
- plots:
|
|
type: file
|
|
description: Plots created by MultiQC
|
|
pattern: "*_data"
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
authors:
|
|
- "@abhi18av"
|
|
- "@bunop"
|
|
- "@drpatelh"
|
|
- "@jfy133"
|