mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-25 23:29:55 +00:00
24 lines
1.1 KiB
Text
24 lines
1.1 KiB
Text
/*
|
|
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
|
|
Nextflow config file for running full-size tests
|
|
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
|
|
Defines input files and everything required to run a full size pipeline test.
|
|
|
|
Use as follows:
|
|
nextflow run nf-core/taxprofiler -profile test_full,<docker/singularity> --outdir <OUTDIR>
|
|
|
|
----------------------------------------------------------------------------------------
|
|
*/
|
|
|
|
params {
|
|
config_profile_name = 'Full test profile'
|
|
config_profile_description = 'Full test dataset to check pipeline function'
|
|
|
|
// Input data for full size test
|
|
// TODO nf-core: Specify the paths to your full test data ( on nf-core/test-datasets or directly in repositories, e.g. SRA)
|
|
// TODO nf-core: Give any required params for the test so that command line flags are not needed
|
|
input = 'https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/samplesheet/samplesheet_full_illumina_amplicon.csv'
|
|
|
|
// Genome references
|
|
genome = 'R64-1-1'
|
|
}
|