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taxprofiler/modules.json

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{
"name": "nf-core/taxprofiler",
"homePage": "https://github.com/nf-core/taxprofiler",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"adapterremoval": {
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"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": ["modules"]
},
"bbmap/bbduk": {
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},
"bowtie2/align": {
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},
"bowtie2/build": {
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},
"bracken/bracken": {
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},
"bracken/combinebrackenoutputs": {
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},
"cat/fastq": {
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},
"centrifuge/centrifuge": {
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},
"centrifuge/kreport": {
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},
"custom/dumpsoftwareversions": {
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"diamond/blastx": {
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},
"falco": {
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"patch": "modules/nf-core/falco/falco.diff"
},
"fastp": {
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},
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},
"filtlong": {
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},
"gunzip": {
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},
"kaiju/kaiju": {
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},
"kaiju/kaiju2krona": {
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"kraken2/kraken2": {
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"krakenuniq/preloadedkrakenuniq": {
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},
"krona/ktimporttaxonomy": {
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"krona/ktimporttext": {
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"malt/run": {
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"megan/rma2info": {
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"metaphlan3/metaphlan3": {
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"porechop/porechop": {
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"patch": "modules/nf-core/porechop/porechop/porechop-porechop.diff"
},
"prinseqplusplus": {
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"samtools/bam2fq": {
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"samtools/stats": {
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"samtools/view": {
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"taxpasta/merge": {
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"untar": {
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}
}
}
}
}
}