millironx/taxprofiler
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taxprofiler/modules/nf-core/modules
History
James A. Fellows Yates 23fb319779
Merge branch 'dev' into complexity-filter-bbduk
2022-04-05 13:11:15 +02:00
..
adapterremoval chore: update adapterremoval 2022-04-05 10:18:34 +02:00
bbmap/bbduk Add bbduk complexity (entropy-based) filtering 2022-04-02 17:02:05 +02:00
cat/fastq Get skeleton read processing to input for profiling 2022-02-18 16:51:01 +01:00
custom/dumpsoftwareversions Template update for nf-core/tools version 2.3.1 2022-03-23 13:57:56 +00:00
fastp Get skeleton read processing to input for profiling 2022-02-18 16:51:01 +01:00
fastqc Template update for nf-core/tools version 2.3.1 2022-03-23 13:57:56 +00:00
kraken2/kraken2 Add Kraken2 and MALT/run as Proof of Concept (currnetly MQC issue) 2022-03-03 17:42:02 +01:00
malt/run Fix MALT multiqc report clash 2022-03-03 18:04:03 +01:00
metaphlan3 chore: add metaphlan3 module 2022-04-02 14:59:44 +02:00
multiqc Template update for nf-core/tools version 2.3.1 2022-03-23 13:57:56 +00:00
porechop Add Porechop module 2022-03-18 14:34:10 +01:00
prinseqplusplus Add prinseq as alternative complexity filtering 2022-04-04 21:16:51 +02:00
untar Adds PoC of untarring system 2022-03-21 14:58:19 +00:00