mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-14 07:03:09 +00:00
107 lines
3.9 KiB
JSON
107 lines
3.9 KiB
JSON
{
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"name": "nf-core/taxprofiler",
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"homePage": "https://github.com/nf-core/taxprofiler",
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"repos": {
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"nf-core/modules": {
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"adapterremoval": {
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"git_sha": "879d42c5e28661fe0a5e744c9e2c515868f9e08a"
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},
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"bbmap/bbduk": {
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},
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"bowtie2/align": {
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},
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"bowtie2/build": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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"cat/fastq": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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"centrifuge/centrifuge": {
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},
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"centrifuge/kreport": {
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},
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"custom/dumpsoftwareversions": {
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},
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"diamond/blastx": {
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},
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"fastp": {
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},
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"fastqc": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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"filtlong": {
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"gunzip": {
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},
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"kaiju/kaiju": {
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},
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"kaiju/kaiju2krona": {
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"kaiju/kaiju2table": {
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"kraken2/kraken2": {
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},
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"krakentools/kreport2krona": {
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},
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"krona/ktimporttaxonomy": {
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},
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"krona/ktimporttext": {
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"malt/run": {
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"megan/rma2info": {
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"metaphlan3": {
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"minimap2/align": {
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"minimap2/index": {
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"motus/merge": {
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"motus/profile": {
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"git_sha": "b6ed584443ad68ac41e6975994139454a4f23c18"
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"multiqc": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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"porechop": {
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"git_sha": "e20e57f90b6787ac9a010a980cf6ea98bd990046"
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},
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"prinseqplusplus": {
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"git_sha": "f1c5384c31e985591716afdd732cf8c2ae29d05b"
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},
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"samtools/bam2fq": {
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"git_sha": "5510ea39fe638594bc26ac34cadf4a84bf27d159"
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},
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"samtools/view": {
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"git_sha": "6b64f9cb6c3dd3577931cc3cd032d6fb730000ce"
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},
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"untar": {
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"git_sha": "e080f4c8acf5760039ed12ec1f206170f3f9a918"
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}
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}
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}
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}
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