millironx/taxprofiler
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taxprofiler/subworkflows/local
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Moritz E. Beber be93eae640 fix: insert .fastq file extension 
The MetaPhlAn3 module computes the input type from the file extension
without the possibility to configure an override. Since AdapterRemoval2
creates files without `.fastq` extensions, MetaPhlAn3 input was determined
to be SAM.
2022-04-02 21:50:13 +02:00
..
db_check.nf Clean up AdapterRemoval and remove all debugging dumps 2022-04-01 21:36:22 +02:00
input_check.nf refactor: make metaphlan3 run in workflow 2022-04-02 14:59:44 +02:00
longread_preprocessing.nf Clean up AdapterRemoval and remove all debugging dumps 2022-04-01 21:36:22 +02:00
shortread_adapterremoval.nf fix: insert .fastq file extension 2022-04-02 21:50:13 +02:00
shortread_fastp.nf Start working on adding adapterremoval 2022-03-31 15:31:45 +02:00
shortread_preprocessing.nf Apply suggestions from code review 2022-04-01 15:34:05 +02:00