Sofia Stamouli e71e7b86a2 Merge pull request #53 from genomic-medicine-sweden/classification_kaiju ... Add kaiju/kaiju in taxprofiler		2022-04-20 10:57:00 +02:00
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db_check.nf	Add centrifuge classificatioN	2022-04-04 13:51:51 +02:00
input_check.nf	Update input_check.nf	2022-04-18 07:35:19 +02:00
longread_preprocessing.nf	Add bbduk complexity (entropy-based) filtering	2022-04-02 17:02:05 +02:00
profiling.nf	Merge pull request #53 from genomic-medicine-sweden/classification_kaiju	2022-04-20 10:57:00 +02:00
shortread_adapterremoval.nf	Flatten the right thing	2022-04-08 13:46:12 +02:00
shortread_complexityfiltering.nf	Add prinseq as alternative complexity filtering	2022-04-04 21:16:51 +02:00
shortread_fastp.nf	Merge branch 'dev' into run-merging	2022-04-12 09:28:10 +02:00
shortread_hostremoval.nf	Remove flagstat as bowtie2 reports this itself	2022-04-03 17:23:14 +02:00
shortread_preprocessing.nf	Add bbduk complexity (entropy-based) filtering	2022-04-02 17:02:05 +02:00