millironx

millironx synced commits to master at millironx/pages from mirror 2023-10-24 13:12:44 -04:00

bcd5dadd19 feat: Add taxprofiler to publications list

millironx pushed to master at millironx/haplotyper-battle-royale

2023-10-19 17:02:04 -04:00

b22ea2664b fix: Add escapes to ML haplotype caller

millironx pushed to master at millironx/haplotyper-battle-royale

2023-10-19 12:40:06 -04:00

3e411cc688 refactor: Switch to SRA direct download for samples

9f70b504e2 feat: Add fasterq-dump module

7e0f64f78b feat: Add input schema to parameter schema

77535ee726 feat: Add parameter validation

eddf9d21f6 refactor: Change hard-coded reference into parameter

Compare 11 commits »

millironx synced commits to feature/about at millironx/pages from mirror 2023-10-17 01:42:46 -04:00

millironx synced new reference feature/about to millironx/pages from mirror 2023-10-17 01:42:46 -04:00

millironx synced and deleted reference dependabot/npm_and_yarn/postcss-8.4.31 at millironx/pages from mirror 2023-10-09 06:12:46 -04:00

millironx synced commits to hotfix/postcss at millironx/pages from mirror 2023-10-09 06:12:46 -04:00

millironx synced new reference hotfix/postcss to millironx/pages from mirror 2023-10-09 06:12:46 -04:00

millironx synced commits to master at millironx/pages from mirror 2023-10-09 06:12:46 -04:00

301444cec1 chore: Update package versions

86f22d1abd refactor: Replace postcss-purgecss import statement

bd7e8234a2 chore: Remove old version of postcss-purgecss

69d6a1ec6a chore: Install the updated version of postcss-purgecss

702d2bb160 refactor: Make postcss-cli a dependency of the package

Compare 7 commits »

millironx synced commits to master at millironx/dotfiles from mirror 2023-10-06 19:42:45 -04:00

632f8edf4d feat: Replace linuxbrew hook with Homebrew hook

dc626c4ed9 fix: Add p10k config for Darwin

ceefb8697e refactor: Rearrange aliases to be in place before hooks

ad7c7b7a4e feat: Add nproc alias for osx

791f4ae7b7 feat: Replace shell execution with shell variable

Compare 5 commits »

millironx synced commits to dependabot/npm_and_yarn/postcss-8.4.31 at millironx/pages from mirror 2023-10-04 12:02:44 -04:00

millironx synced new reference dependabot/npm_and_yarn/postcss-8.4.31 to millironx/pages from mirror 2023-10-04 12:02:44 -04:00

millironx synced commits to master at millironx/pages from mirror 2023-09-30 18:12:48 -04:00

3fc66b2583 refactor: Update link to Honors thesis to be DOI

millironx pushed to master at millironx/haplotyper-battle-royale

2023-09-30 17:20:24 -04:00

38d779b1dc fix: Use GitHub containers registry for HapLink modules

millironx pushed to master at millironx/haplotyper-battle-royale

2023-09-30 16:12:10 -04:00

2f96ba4e44 feat!: Remove PREDICTHAPLO module

millironx pushed to master at millironx/haplotyper-battle-royale

2023-09-29 15:17:55 -04:00

588d307ff6 fix: Remove invalid shorah parameter

millironx pushed to master at millironx/haplotyper-battle-royale

2023-09-26 09:50:07 -04:00

b98a797701 feat: Add control flow for choosing haplotypers

9364225e74 fix: Change input cardinality on haplotyping modules

355ce9a00a feat: Add SHORAH processes to pipeline

444001b499 feat: Add QUASIRECOMB to pipeline

5cc8867799 feat: Add PREDICTHAPLO to pipeline

Compare 40 commits »

millironx pushed to master at millironx/haplotyper-battle-royale

2023-08-19 15:37:05 -04:00

a91632a883 feat: Force containerized R environments

millironx pushed to master at millironx/haplotyper-battle-royale

2023-08-11 00:17:31 -04:00

1e741e1db1 fix: Copy over every directory in @INC

millironx pushed to master at millironx/haplotyper-battle-royale

2023-08-11 00:16:21 -04:00

c3c3f8859a fix: Copy over every directory in @INC