2022-07-05 15:53:34 +00:00
|
|
|
# Changelog
|
|
|
|
|
|
|
|
|
|
All notable changes to this project will be documented in this file.
|
|
|
|
|
|
|
|
|
|
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0)
|
|
|
|
|
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
|
|
|
|
|
|
|
|
|
|
## [Unreleased]
|
|
|
|
|
|
2022-07-21 12:59:47 +00:00
|
|
|
## [0.1.1] - 2022-07-21
|
|
|
|
|
|
|
|
|
|
### Added
|
|
|
|
|
|
|
|
|
|
- Constructor for `Variant` based on `Variation`s ([#18](https://github.com/BioJulia/SequenceVariation.jl/pull/18))
|
|
|
|
|
|
|
|
|
|
## [0.1.0] - 2022-07-14
|
|
|
|
|
|
2022-07-05 15:53:34 +00:00
|
|
|
### Added
|
|
|
|
|
|
|
|
|
|
- Mutation types (`Substitution`, `Deletion`, `Insertion`)
|
|
|
|
|
- `Variant` type to store groups of mutations together
|
|
|
|
|
- `Variation` type to store and compare individual mutations
|
|
|
|
|
- `reconstruct!` function to build mutated sequences from `Variant`s
|
|
|
|
|
- `Variant` constructor to automatically detect mutations from a `BioAlignments.PairwiseAlignment`
|
2022-07-13 21:52:11 +00:00
|
|
|
- Methods to get reference and alternate bases from a `Variation`
|
2022-07-05 15:53:34 +00:00
|
|
|
|
2022-07-21 12:59:47 +00:00
|
|
|
[unreleased]: https://github.com/BioJulia/SequenceVariation.jl/compare/v0.1.1...HEAD
|
|
|
|
|
[0.1.1]: https://github.com/BioJulia/SequenceVariation.jl/compare/v0.1.0...v0.1.1
|
|
|
|
|
[0.1.0]: https://github.com/BioJulia/SequenceVariation.jl/releases/tag/v0.1.0
|
