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Add test for combined clips
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@ -115,4 +115,7 @@ end
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# Test for ending soft clip
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@test Variant(PairwiseAlignment(AlignedSequence(mutseq, Alignment("7=3S", 1, 1)), refseq)) == refvar
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# Test for ending soft+hard clip
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@test Variant(PairwiseAlignment(AlignedSequence(mutseq, Alignment("7=3S2H", 1, 1)), refseq)) == refvar
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end
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