millironx/SequenceVariation.jl
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Author SHA1 Message Date
Thomas A. Christensen II
23f75aad22
Add CompatHelper workflow 2022-07-11 13:22:47 -05:00
Thomas A. Christensen II
6e2eab42c7
Add unit testing workflow 2022-07-11 13:22:45 -05:00
Thomas A. Christensen II
c5b28e282f
Add TagBot workflow 2022-07-11 13:10:35 -05:00
Thomas A. Christensen II
48470028ca
Add documentation workflow 2022-07-05 09:29:51 -05:00
Thomas A. Christensen II
a1f55d1c70
Add Julia gitignore 2022-07-05 09:19:06 -05:00
Thomas A. Christensen II
d9cd1fb33f
Remove Manifest.toml 2022-07-05 09:17:50 -05:00
Thomas A. Christensen II
e79968c4ec
Merge pull request #11 from MillironX/feature/variations-from-variant 2022-07-05 09:16:03 -05:00
Thomas A. Christensen II
36cbd5abb9
Add tests for variations function 2022-07-05 09:10:02 -05:00
Thomas A. Christensen II
6d7a93604a
Add function to get variations from variant 2022-07-05 09:10:01 -05:00
Thomas A. Christensen II
dbdc575d75
Add accessor functions for Variant 2022-07-05 09:10:00 -05:00
Thomas A. Christensen II
89cad0120f
Add rightposition functions 2022-07-05 09:09:53 -05:00
Thomas A. Christensen II
538b612faf
Merge pull request #10 from MillironX/feature/variation-equality 2022-06-30 17:04:01 -05:00
Thomas A. Christensen II
fe1bbcc0f3
Add hash function for Variation 2022-06-30 16:48:37 -05:00
Thomas A. Christensen II
70965732cf
Add equality function for Variation 2022-06-30 16:48:24 -05:00
Thomas A. Christensen II
5f7d5e59a1
Merge pull request #9 from MillironX/feature/variations-parse 2022-06-30 16:22:20 -05:00
Thomas A. Christensen II
6bc1528d18
Add tests for Variation parsing 2022-06-14 16:24:55 -05:00
Thomas A. Christensen II
2d05b233a9
Add accessor functions for Variation properties 2022-06-14 16:24:05 -05:00
Thomas A. Christensen II
1e6f6ea075
Add accessor functions for Edit properties 2022-06-14 16:17:16 -05:00
Thomas A. Christensen II
101f401635
Add BioGenerics dependency 2022-06-14 16:15:04 -05:00
Thomas A. Christensen II
9967ff4df2
Add test dependencies to project file 2022-06-14 15:36:58 -05:00
Thomas A. Christensen II
76d5b6059e
Add Variation constructor based on edit parsing 2022-06-14 14:48:39 -05:00
Thomas A. Christensen II
ade9b7e41d
Fix inconsistent Variation positions (#4) 
* Change Variant constructor to use alignment positions

Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>

* Add test for positions of Variations

Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
 2022-05-06 12:26:49 +02:00
Thomas A. Christensen II
d0f0f65d7f
Fix show function for Variations with Insertion edits (#3) 
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
 2022-05-06 12:25:07 +02:00
Jakob Nybo Nissen
92a2d40553 Implement translate 2022-01-26 14:59:19 +01:00
Jakob Nybo Nissen
8024d50889 More stuff 2021-09-15 13:33:37 +02:00
Jakob Nybo Nissen
87277268f6 Full rewrite 2021-08-24 16:30:11 +02:00
Jakob Nybo Nissen
642658f592 Add parsing 2021-03-02 17:55:17 +01:00
Jakob Nybo Nissen
354f18e0e4 Switch to SumTypes 2021-03-02 15:50:37 +01:00
Jakob Nybo Nissen
40749eb6f5 Start fixing 2021-03-02 13:20:25 +01:00
Jakob Nybo Nissen
64ae3bc862 Rewrite 2020-10-20 15:26:27 +02:00
Jakob Nybo Nissen
ad3fe4303f Initial commit 2020-10-01 17:03:01 +02:00