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75 lines
4.9 KiB
Markdown
75 lines
4.9 KiB
Markdown
# <img src="docs/src/assets/logo.png" width="30%" align="right" /> SequenceVariation
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[](https://www.repostatus.org/#wip)
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[](https://github.com/BioJulia/SequenceVariation.jl/releases/latest)
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[](https://github.com/BioJulia/SequenceVariation.jl/blob/master/LICENSE)
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[](https://biojulia.github.io/SequenceVariation.jl/stable)
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[](https://biojulia.github.io/SequenceVariation.jl/dev/)
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[](https://zenodo.org/badge/latestdoi/343847382)
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> This project follows the [semver](https://semver.org) _pro forma_ and uses the [OneFlow branching model](https://www.endoflineblog.com/oneflow-a-git-branching-model-and-workflow).
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## Description
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SequenceVariation provides a Julia vocabulary for comparing genetic mutations within biological sequences.
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## Installation
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You can install SequenceVariation from the [Julia REPL](https://docs.julialang.org/en/v1/manual/getting-started/).
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Press `]` to enter [pkg mode](https://docs.julialang.org/en/v1/stdlib/Pkg/), and enter the following:
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```julia
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add SequenceVariation
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```
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## Testing
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SequenceVariation is tested against Julia `1.6` (LTS), `1.X` (release) and nightly on Linux.
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**Latest build status:**
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[](https://github.com/BioJulia/SequenceVariation.jl/actions/workflows/UnitTests.yml)
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[](https://github.com/BioJulia/SequenceVariation.jl/actions?query=workflow%3ADocumentation+branch%3Amaster)
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[](https://codecov.io/gh/BioJulia/SequenceVariation.jl)
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[](https://github.com/JuliaTesting/Aqua.jl)
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## Contributing
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We appreciate [contributions](https://github.com/BioJulia/SequenceVariation.jl/graphs/contributors) from users including reporting bugs, fixing issues, improving performance and adding new features.
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Take a look at the [contributing files](https://github.com/BioJulia/Contributing) for detailed contributor and maintainer guidelines, and code of conduct.
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### Financial contributions
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We also welcome financial contributions in full transparency on our [open collective](https://opencollective.com/biojulia).
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Anyone can file an expense.
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If the expense makes sense for the development the core contributors and the person who filed the expense will be reimbursed.
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## Backers & Sponsors
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Thank you to all our backers and sponsors!
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Love our work and community? [Become a backer](https://opencollective.com/biojulia#backer).
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[](https://opencollective.com/biojulia#backers)
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Does your company use BioJulia?
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Help keep BioJulia feature rich and healthy by [sponsoring the project](https://opencollective.com/biojulia#sponsor).
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Your logo will show up here with a link to your website.
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[](https://opencollective.com/biojulia/sponsor/0/website)
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[](https://opencollective.com/biojulia/sponsor/1/website)
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[](https://opencollective.com/biojulia/sponsor/2/website)
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[](https://opencollective.com/biojulia/sponsor/3/website)
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[](https://opencollective.com/biojulia/sponsor/4/website)
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[](https://opencollective.com/biojulia/sponsor/5/website)
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[](https://opencollective.com/biojulia/sponsor/6/website)
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[](https://opencollective.com/biojulia/sponsor/7/website)
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[](https://opencollective.com/biojulia/sponsor/8/website)
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[](https://opencollective.com/biojulia/sponsor/9/website)
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## Questions?
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If you have a question about contributing or using BioJulia software, come on over and chat to us on [the Julia Slack workspace](https://julialang.org/slack/), or you can try the [Bio category of the Julia discourse site](https://discourse.julialang.org/c/domain/bio).
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