millironx
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XAM.jl
mirror of https://github.com/MillironX/XAM.jl
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139 Commits
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10 Tags
2.5 MiB
develop
master
feature/BioAlignmentsv2.2
operations-fix
alnpos-compat
gh-pages
hotfix/issue-31
hotfix/issue-31-virtualoffset
hotfix/issue-31-virtualoffset2
hotfix/issue-31-tryread
hotfix/issue-31-eof
pu/v0.3.0
compathelper/new_version/2021-04-29-00-03-02-365-4269583037
compathelper/new_version/2021-04-02-02-40-39-288-122334684
feature/CodecBGZF-issue-31
feature/CodecBGZF
hotfix/issue-34
hotfix/field_access
develop-2020-08-13-0406
workaround_23
release/v0.2.5
v0.2.4
v0.2.3
v0.2.1
v0.2.0
v0.1.1
v0.1.0
v0.2.2
v0.2.5
v0.2.6
v0.2.7
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Commit Graph

139 Commits (develop)
 

Author SHA1 Message Date
Ciarán O’Mara c423694f29 Cater for blank sam files 3 years ago
Ciarán O’Mara 64f371e1e4 Adjust for Automa 0.8.1 
Defines an unambiguous state machine.
https://github.com/BioJulia/Automa.jl/pull/49.
 3 years ago
Ciarán O’Mara aaf3710fbe Increment version 3 years ago
Jakob Nissen b086fefbd5 Make BAM record layout match BAM specs 4 years ago
Ciarán O'Mara 8836b4dbb6
Merge pull request #29 from CiaranOMara/feature/crosscheck 
Begin crosschecks
 4 years ago
Ciarán O'Mara d38c2becf0 Minimal adjustements 4 years ago
Ciarán O'Mara 433b8d14e8 Begin crosschecks 4 years ago
Jonathan Bieler dde235fbc8 improve BAM.quality performance 4 years ago
Ciarán O'Mara dce44b3f55 Tidy 4 years ago
Ciarán O'Mara 69e77a234c Note 4 years ago
Ciarán O'Mara a51e91141f Merge branch 'hotfix/isnextmapped' 4 years ago
Ciarán O'Mara 149d2cd898 Merge branch 'master' into develop 4 years ago
Diego Alvarez 639b8238c7 Correct scope 4 years ago
Ciarán O'Mara eb11106b01 Increment version 4 years ago
Ciarán O'Mara dfa5a3217f Merge branch 'release/v0.2.5' 4 years ago
Ciarán O'Mara b97c97e90f Merge branch 'master' into develop 4 years ago
Ciarán O'Mara bde477d54f Increment version 4 years ago
Ciarán O'Mara 6141d679e8 Use `copyto!` 
https://github.com/BioJulia/BioSequences.jl/pull/95
 4 years ago
Ciarán O'Mara 946068b2f3 Simplify use of `appendfrom!` 4 years ago
Ciarán O'Mara 436cfd84ba Use @info 4 years ago
Ciarán O'Mara 73de48e232 Move imports 4 years ago
Ciarán O'Mara 0ac352f1d2 Isolate testsets 4 years ago
Ciarán O'Mara eaf5c73eb5 Update CI and documentation for the general registry 
- Update documentation workflow.
- Update CompatHelper workflow.
- Update TagBot workflow.
- Update unit test workflow.
- Update codecov.
 4 years ago
Ciarán O'Mara 81dbf41798 Merge branch 'master' into develop 4 years ago
Ciarán O'Mara 551a5906c5
Merge pull request #12 from BioJulia/hotfix/iterate 
hotfix/iterate
 4 years ago
Ciarán O'Mara 8b7a2ecc2b Correct not found check 4 years ago
Ciarán O'Mara cc18311539 Increment version 4 years ago
Ciarán O'Mara 32a2b129e1 Merge branch 'master' into develop 4 years ago
Ciarán O'Mara 060349bd2b Merge branch 'hotfix/iteration' 4 years ago
Ciarán O'Mara b440bc3c4d Update documentation 4 years ago
Ciarán O'Mara f00547177f Empty records during iteration 4 years ago
Ciarán O'Mara 300158dbef Record equivalency functions 4 years ago
Ciarán O'Mara 5fa8c5bd2e Tests for in-place-reading pattern 4 years ago
Ciarán O'Mara bb13a38cf7 Increment version 4 years ago
Ciarán O'Mara af675a2371 Merge branch 'master' into develop 4 years ago
Ciarán O'Mara 0e0908f985 Merge branch 'hotfix/memory' 4 years ago
Ciarán O'Mara 3e1a802372 Ensure fields are empty 4 years ago
Ciarán O'Mara 89d7e94f77 Increment version 4 years ago
Ciarán O'Mara aec919c713 Use unsafe copy 4 years ago
Ciarán O'Mara 6ae1180cfa Merge branch 'hotfix/header' 4 years ago
Ciarán O'Mara 429f69d84b Merge branch 'master' into develop 4 years ago
Ciarán O'Mara d0e2560ec4 Correct header parsing 4 years ago
Ciarán O'Mara e69c6de586 Equality comparators 4 years ago
Ciarán O'Mara f6846edfb1 Check header in roundtrip 4 years ago
Ciarán O'Mara cc2af1976b Use broadcast 4 years ago
Ciarán O'Mara 08e253c297 Use collect 4 years ago
Ciarán O'Mara 955cf8fbe2 Correct link 4 years ago
Ciarán O'Mara 031751f6b3 Increment version 4 years ago
Ciarán O'Mara c139754845 Merge branch 'release/v0.2.0' 4 years ago
Ciarán O'Mara 8279f545f5 Merge branch 'master' into develop 4 years ago