Ciarán O'Mara
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69e77a234c
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Note
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2020-07-08 23:30:44 +10:00 |
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Ciarán O'Mara
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6141d679e8
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Use copyto!
https://github.com/BioJulia/BioSequences.jl/pull/95
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2020-06-22 10:30:51 +10:00 |
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Ciarán O'Mara
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946068b2f3
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Simplify use of appendfrom!
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2020-06-22 10:30:51 +10:00 |
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Ciarán O'Mara
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436cfd84ba
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Use @info
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2020-06-20 23:32:01 +10:00 |
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Ciarán O'Mara
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73de48e232
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Move imports
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2020-06-20 23:31:53 +10:00 |
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Ciarán O'Mara
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32a2b129e1
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Merge branch 'master' into develop
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2020-04-18 00:26:14 +10:00 |
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Ciarán O'Mara
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f00547177f
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Empty records during iteration
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2020-04-17 15:56:23 +10:00 |
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Ciarán O'Mara
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300158dbef
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Record equivalency functions
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2020-04-17 15:56:23 +10:00 |
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Ciarán O'Mara
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af675a2371
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Merge branch 'master' into develop
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2020-04-12 17:35:21 +10:00 |
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Ciarán O'Mara
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3e1a802372
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Ensure fields are empty
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2020-04-12 17:35:01 +10:00 |
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Ciarán O'Mara
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aec919c713
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Use unsafe copy
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2020-03-21 17:34:10 +11:00 |
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Ciarán O'Mara
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429f69d84b
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Merge branch 'master' into develop
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2020-03-21 17:28:02 +11:00 |
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Ciarán O'Mara
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d0e2560ec4
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Correct header parsing
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2020-03-21 17:18:39 +11:00 |
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Ciarán O'Mara
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e69c6de586
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Equality comparators
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2020-03-21 17:18:34 +11:00 |
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Ciarán O'Mara
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cc2af1976b
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Use broadcast
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2020-03-21 12:52:50 +11:00 |
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Ciarán O'Mara
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08e253c297
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Use collect
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2020-03-21 12:52:45 +11:00 |
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Ciarán O'Mara
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de56faf066
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Migrate from BufferedStreams to TranscodingStreams
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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12db2c4ea8
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Align emission symbols for TranscodingStreams
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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6cd89aba08
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Move isinteractive into machine
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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892ad0d7dc
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Pipe into eval
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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e63ce2e398
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Group Automa into readrecord.jl
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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365f7922fa
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Quick fix for BioGenerics.ReaderHelper functions
This fix is likely to be replaced when migrating to TranscodingStreams.
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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c59a157675
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Quick fix for BioCore.Ragel.State
This fix is likely to be replaced when migrating to TranscodingStreams.
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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2cad552f63
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Quick fix for BioCore.RecordHelper: unsafe_parse_decimal
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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c4f3c4b0df
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Migrate to BioGenerics
Basic find and replace.
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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ef99c70317
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Flatten returns
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2020-03-13 22:58:34 +11:00 |
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Ciarán O'Mara
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f272b41031
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Flatten
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2020-03-13 22:09:28 +11:00 |
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Konrad Herbst
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8d14563f9d
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🐛 Fix SAM.alignlength(record::Record)::Int (#37)
Fixes issue #37 by re-initializing `len` in `SAM.alignlength`.
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2020-03-13 20:41:06 +11:00 |
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Ciarán O'Mara
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1a3c986152
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Minimal code adjustments for working separation
- Update to use GenomicFeatures v2.
- BioAlignments v2.
- BioSequences v2.
- Indexes v0.1.
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2020-02-20 21:19:07 +11:00 |
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Ciarán O'Mara
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7a56931b90
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Naive code roundup
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2020-02-20 10:19:28 +11:00 |
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