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XAM.jl/CHANGELOG.md

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Changelog

All notable changes to HapLink.jl will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Unreleased

Added

  • Added BAM.Reader index support for BAI object (#56)
  • Added doi badge

Changed

  • Subtype from XAMReader and XAMWriter from common abstract types.
  • Subtype from XAMRecord.
  • Unified flag queries.

0.3.1

Changed

  • Upgraded to BioAlignments v3 (#55)

0.3.0 - 2022-10-10

Added

  • Crosschecks for SAM and BAM (#29)
  • Improved documentation for flags (#43)

Changed

  • BAM.quality performance improved (#21)
  • Updated BioAlignments to v2.2 and BioSequences to v3 (#48)

Fixed

  • BAM.Record layout now matches the BAM specs (#26)