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6bc08e15b2
Test for expected results as described in https://github.com/BioJulia/XAM.jl/issues/31. This commit needs redoing once https://github.com/BioJulia/FormatSpecimens.jl/pull/5 is released upstream.
28 lines
544 B
Julia
28 lines
544 B
Julia
using Test
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using BioGenerics
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using FormatSpecimens
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using GenomicFeatures
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using XAM
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import BioAlignments: Alignment, AlignmentAnchor, OP_START, OP_MATCH, OP_DELETE
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import BGZFStreams: BGZFStream
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import BioGenerics.Exceptions: MissingFieldException
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import BioSequences: @dna_str, @aa_str
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# Generate a random range within `range`.
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function randrange(range)
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x = rand(range)
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y = rand(range)
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if x < y
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return x:y
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else
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return y:x
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end
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end
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include("test_sam.jl")
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include("test_bam.jl")
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include("test_issues.jl")
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