Add GFF3 dependency

Manifest.toml

@@ -750,6 +750,12 @@ version = "0.5.0"
 deps = ["Random"]
 uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"
 
+[[GFF3]]
+deps = ["Automa", "BGZFStreams", "BioGenerics", "BioSequences", "FASTX", "GenomicFeatures", "Indexes", "TranscodingStreams", "URIParser"]
+git-tree-sha1 = "41449da1ca0e67339caf0c2c916950a90d25bd52"
+uuid = "af1dc308-cb6b-11e8-32f0-31192efa90f6"
+version = "0.2.1"
+
 [[GLFW_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"]
 git-tree-sha1 = "51d2dfe8e590fbd74e7a842cf6d13d8a2f45dc01"
@@ -2376,6 +2382,12 @@ git-tree-sha1 = "adea0d50015bad1698e08a7500185fff0795f638"
 uuid = "75842c30-9b2d-11e9-3f58-f17fe2b89951"
 version = "0.1.0"
 
+[[URIParser]]
+deps = ["Unicode"]
+git-tree-sha1 = "53a9f49546b8d2dd2e688d216421d050c9a31d0d"
+uuid = "30578b45-9adc-5946-b283-645ec420af67"
+version = "0.4.1"
+
 [[URIs]]
 git-tree-sha1 = "97bbe755a53fe859669cd907f2d96aee8d2c1355"
 uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"

Project.toml

@@ -31,6 +31,7 @@ Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 EzXML = "8f5d6c58-4d21-5cfd-889c-e3ad7ee6a615"
 FASTX = "c2308a5c-f048-11e8-3e8a-31650f418d12"
 Formatting = "59287772-0a20-5a39-b81b-1366585eb4c0"
+GFF3 = "af1dc308-cb6b-11e8-32f0-31192efa90f6"
 GLM = "38e38edf-8417-5370-95a0-9cbb8c7f171a"
 GenomeGraphs = "3aa97884-90e5-11e8-2134-af657ec4f203"
 GenomicAnnotations = "4f8a0a0a-376d-5ac0-ab14-e88793df67f0"

README.md

@@ -68,6 +68,7 @@ plus
 - [x] [FASTX](https://github.com/BioJulia/FASTX.jl)
 - [x] [GenomicAnnotations](https://github.com/BioJulia/GenomicAnnotations.jl)
 - [x] [GenomicFeatures](https://github.com/BioJulia/GenomicFeatures.jl)
+- [x] [GFF3](https://github.com/BioJulia/GFF3.jl)
 - [x] [MMTF](https://github.com/BioJulia/MMTF.jl)
 - [x] [TwoBit](https://github.com/BioJulia/TwoBit.jl)
 - [x] [VariantCallFormat](https://github.com/rasmushenningsson/VariantCallFormat.jl)