mirror of
https://github.com/MillironX/docker-BioJulia.git
synced 2024-12-03 10:59:55 +00:00
[⚡ AUTOMATED]: Pkg upgrade for 2024-10-02
Files changed:\nM Manifest.toml
This commit is contained in:
parent
f870954174
commit
5b5094952e
1 changed files with 60 additions and 54 deletions
114
Manifest.toml
114
Manifest.toml
|
@ -259,15 +259,15 @@ version = "0.2.2"
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[[ChainRules]]
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deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"]
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git-tree-sha1 = "83806b5196e1e9827db0429a7579824c8b0e03ce"
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git-tree-sha1 = "be227d253d132a6d57f9ccf5f67c0fb6488afd87"
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uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2"
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version = "1.70.0"
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version = "1.71.0"
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[[ChainRulesCore]]
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deps = ["Compat", "LinearAlgebra", "SparseArrays"]
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git-tree-sha1 = "71acdbf594aab5bbb2cec89b208c41b4c411e49f"
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git-tree-sha1 = "3e4b134270b372f2ed4d4d0e936aabaefc1802bc"
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uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
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version = "1.24.0"
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version = "1.25.0"
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[[ChangesOfVariables]]
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deps = ["InverseFunctions", "LinearAlgebra", "Test"]
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@ -435,9 +435,9 @@ version = "1.0.2"
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[[DSP]]
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deps = ["Compat", "FFTW", "IterTools", "LinearAlgebra", "Polynomials", "Random", "Reexport", "SpecialFunctions", "Statistics"]
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git-tree-sha1 = "f7f4319567fe769debfcf7f8c03d8da1dd4e2fb0"
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||||
git-tree-sha1 = "0df00546373af8eee1598fb4b2ba480b1ebe895c"
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||||
uuid = "717857b8-e6f2-59f4-9121-6e50c889abd2"
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version = "0.7.9"
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version = "0.7.10"
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[[DataAPI]]
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git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe"
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@ -451,10 +451,10 @@ uuid = "124859b0-ceae-595e-8997-d05f6a7a8dfe"
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version = "0.7.8"
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[[DataFrames]]
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deps = ["Compat", "DataAPI", "DataStructures", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
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git-tree-sha1 = "04c738083f29f86e62c8afc341f0967d8717bdb8"
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deps = ["Compat", "DataAPI", "DataStructures", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
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git-tree-sha1 = "fb61b4812c49343d7ef0b533ba982c46021938a6"
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uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
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version = "1.6.1"
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version = "1.7.0"
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[[DataStructures]]
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deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
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@ -479,9 +479,9 @@ version = "1.14.10+0"
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[[Debugger]]
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deps = ["CodeTracking", "Crayons", "Highlights", "InteractiveUtils", "JuliaInterpreter", "Markdown", "REPL"]
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git-tree-sha1 = "058d715709c76658d3936074157921643a3041bd"
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git-tree-sha1 = "35e6b5a354449f0fbd504d7f9248870b060f177e"
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uuid = "31a5f54b-26ea-5ae9-a837-f05ce5417438"
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version = "0.7.9"
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version = "0.7.10"
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[[DecisionTree]]
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deps = ["AbstractTrees", "DelimitedFiles", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics"]
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@ -559,9 +559,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
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[[Distributions]]
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deps = ["AliasTables", "ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"]
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git-tree-sha1 = "e6c693a0e4394f8fda0e51a5bdf5aef26f8235e9"
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git-tree-sha1 = "d7477ecdafb813ddee2ae727afa94e9dcb5f3fb0"
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uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
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version = "0.25.111"
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version = "0.25.112"
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[[DocStringExtensions]]
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deps = ["LibGit2"]
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@ -621,9 +621,9 @@ version = "2.1.2"
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[[FFMPEG]]
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deps = ["FFMPEG_jll"]
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git-tree-sha1 = "b57e3acbe22f8484b4b5ff66a7499717fe1a9cc8"
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git-tree-sha1 = "53ebe7511fa11d33bec688a9178fac4e49eeee00"
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uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a"
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version = "0.4.1"
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version = "0.4.2"
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[[FFMPEG_jll]]
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deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"]
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@ -645,9 +645,9 @@ version = "1.8.0"
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[[FFTW_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
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git-tree-sha1 = "c6033cc3892d0ef5bb9cd29b7f2f0331ea5184ea"
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git-tree-sha1 = "4d81ed14783ec49ce9f2e168208a12ce1815aa25"
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uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a"
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version = "3.3.10+0"
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version = "3.3.10+1"
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[[FastBroadcast]]
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deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"]
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@ -828,9 +828,9 @@ version = "9.55.0+4"
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[[Glib_jll]]
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deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"]
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git-tree-sha1 = "7c82e6a6cd34e9d935e9aa4051b66c6ff3af59ba"
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git-tree-sha1 = "674ff0db93fffcd11a3573986e550d66cd4fd71f"
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uuid = "7746bdde-850d-59dc-9ae8-88ece973131d"
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version = "2.80.2+0"
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version = "2.80.5+0"
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[[Graphics]]
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deps = ["Colors", "LinearAlgebra", "NaNMath"]
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@ -1119,9 +1119,9 @@ version = "1.1.0"
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[[InverseFunctions]]
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deps = ["Dates", "Test"]
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git-tree-sha1 = "2787db24f4e03daf859c6509ff87764e4182f7d1"
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git-tree-sha1 = "a779299d77cd080bf77b97535acecd73e1c5e5cb"
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uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
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version = "0.1.16"
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version = "0.1.17"
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[[InvertedIndices]]
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git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038"
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@ -1199,9 +1199,9 @@ version = "0.1.5"
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[[JpegTurbo_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl"]
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git-tree-sha1 = "c84a835e1a09b289ffcd2271bf2a337bbdda6637"
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git-tree-sha1 = "25ee0be4d43d0269027024d75a24c24d6c6e590c"
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uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
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version = "3.0.3+0"
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version = "3.0.4+0"
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[[JuliaInterpreter]]
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deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"]
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@ -1283,9 +1283,9 @@ version = "18.1.7+0"
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[[LZO_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl"]
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git-tree-sha1 = "70c5da094887fd2cae843b8db33920bac4b6f07d"
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git-tree-sha1 = "854a9c268c43b77b0a27f22d7fab8d33cdb3a731"
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uuid = "dd4b983a-f0e5-5f8d-a1b7-129d4a5fb1ac"
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version = "2.10.2+0"
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version = "2.10.2+1"
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[[LaTeXStrings]]
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git-tree-sha1 = "50901ebc375ed41dbf8058da26f9de442febbbec"
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@ -1449,9 +1449,9 @@ version = "0.12.171"
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[[Lz4_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl"]
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git-tree-sha1 = "7f26c8fc5229e68484e0b3447312c98e16207d11"
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git-tree-sha1 = "abf88ff67f4fd89839efcae2f4c39cbc4ecd0846"
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uuid = "5ced341a-0733-55b8-9ab6-a4889d929147"
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version = "1.10.0+0"
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version = "1.10.0+1"
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[[MKL_jll]]
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deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "oneTBB_jll"]
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@ -1477,6 +1477,12 @@ git-tree-sha1 = "2fa9ee3e63fd3a4f7a9a4f4744a52f4856de82df"
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uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
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version = "0.5.13"
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[[MakieCore]]
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deps = ["Observables", "REPL"]
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git-tree-sha1 = "9b11acd07f21c4d035bd4156e789532e8ee2cc70"
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uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b"
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version = "0.6.9"
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[[ManualMemory]]
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git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd"
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uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667"
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@ -1573,9 +1579,9 @@ version = "1.0.20"
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[[MutableArithmetics]]
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deps = ["LinearAlgebra", "SparseArrays", "Test"]
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git-tree-sha1 = "d0a6b1096b584a2b88efb70a92f8cb8c881eb38a"
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git-tree-sha1 = "3eba928678787843e504c153a9b8e80d7d73ab17"
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uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
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version = "1.4.6"
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version = "1.5.0"
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[[MyterialColors]]
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git-tree-sha1 = "01d8466fb449436348999d7c6ad740f8f853a579"
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@ -1620,9 +1626,9 @@ version = "0.9.8"
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[[NearestNeighbors]]
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deps = ["Distances", "StaticArrays"]
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git-tree-sha1 = "91a67b4d73842da90b526011fa85c5c4c9343fe0"
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git-tree-sha1 = "3cebfc94a0754cc329ebc3bab1e6c89621e791ad"
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uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
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version = "0.4.18"
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version = "0.4.20"
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[[Netpbm]]
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deps = ["FileIO", "ImageCore", "ImageMetadata"]
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@ -1676,9 +1682,9 @@ version = "1.7.1"
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[[OnlineStatsBase]]
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deps = ["AbstractTrees", "Dates", "LinearAlgebra", "OrderedCollections", "Statistics", "StatsBase"]
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git-tree-sha1 = "9a067a4ea67d1ebab4554b73792dd429f098387c"
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git-tree-sha1 = "a5a5a68d079ce531b0220e99789e0c1c8c5ed215"
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uuid = "925886fa-5bf2-5e8e-b522-a9147a512338"
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version = "1.7.0"
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version = "1.7.1"
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[[OpenBLAS_jll]]
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deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
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@ -1708,9 +1714,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
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[[OpenSSL_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl"]
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git-tree-sha1 = "a12e56c72edee3ce6b96667745e6cbbe5498f200"
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git-tree-sha1 = "ad31332567b189f508a3ea8957a2640b1147ab00"
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uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95"
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version = "1.1.23+0"
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version = "1.1.23+1"
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[[OpenSpecFun_jll]]
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deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"]
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@ -1863,10 +1869,10 @@ uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad"
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version = "0.2.2"
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[[Polynomials]]
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deps = ["LinearAlgebra", "RecipesBase"]
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git-tree-sha1 = "a14a99e430e42a105c898fcc7f212334bc7be887"
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deps = ["ChainRulesCore", "LinearAlgebra", "MakieCore", "MutableArithmetics", "RecipesBase"]
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git-tree-sha1 = "3aa2bb4982e575acd7583f01531f241af077b163"
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uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
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version = "3.2.4"
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version = "3.2.13"
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[[PooledArrays]]
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deps = ["DataAPI", "Future"]
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@ -1973,9 +1979,9 @@ version = "5.15.3+2"
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[[QuadGK]]
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deps = ["DataStructures", "LinearAlgebra"]
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git-tree-sha1 = "1d587203cf851a51bf1ea31ad7ff89eff8d625ea"
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git-tree-sha1 = "cda3b045cf9ef07a08ad46731f5a3165e56cf3da"
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uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
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version = "2.11.0"
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version = "2.11.1"
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[[QuantEcon]]
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deps = ["DSP", "DataStructures", "Distributions", "FFTW", "Graphs", "LinearAlgebra", "Markdown", "NLopt", "Optim", "Pkg", "Primes", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "Test"]
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@ -2093,9 +2099,9 @@ version = "0.5.1+0"
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[[Roots]]
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deps = ["Accessors", "ChainRulesCore", "CommonSolve", "Printf"]
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git-tree-sha1 = "455bc2a1eef4095b7e05c7666c92c9fcbefd842a"
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git-tree-sha1 = "3a7c7e5c3f015415637f5debdf8a674aa2c979c4"
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uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665"
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version = "2.2.0"
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version = "2.2.1"
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[[Rotations]]
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deps = ["LinearAlgebra", "Quaternions", "Random", "RecipesBase", "StaticArrays"]
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@ -2114,9 +2120,9 @@ uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
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[[SIMD]]
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deps = ["PrecompileTools"]
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git-tree-sha1 = "2803cab51702db743f3fda07dd1745aadfbf43bd"
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git-tree-sha1 = "98ca7c29edd6fc79cd74c61accb7010a4e7aee33"
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uuid = "fdea26ae-647d-5447-a871-4b548cad5224"
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version = "3.5.0"
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version = "3.6.0"
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[[SIMDTypes]]
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git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c"
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@ -2829,15 +2835,15 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
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[[Zstd_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl"]
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git-tree-sha1 = "e678132f07ddb5bfa46857f0d7620fb9be675d3b"
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git-tree-sha1 = "555d1076590a6cc2fdee2ef1469451f872d8b41b"
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uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
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version = "1.5.6+0"
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version = "1.5.6+1"
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[[Zygote]]
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deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"]
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git-tree-sha1 = "19c586905e78a26f7e4e97f81716057bd6b1bc54"
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git-tree-sha1 = "f2f85ad73ca67b5d3c94239b0fde005e0fe2d900"
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uuid = "e88e6eb3-aa80-5325-afca-941959d7151f"
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version = "0.6.70"
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version = "0.6.71"
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[[ZygoteRules]]
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deps = ["ChainRulesCore", "MacroTools"]
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@ -2883,21 +2889,21 @@ version = "2.0.3+0"
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[[libpng_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"]
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git-tree-sha1 = "d7015d2e18a5fd9a4f47de711837e980519781a4"
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git-tree-sha1 = "b70c870239dc3d7bc094eb2d6be9b73d27bef280"
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uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
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version = "1.6.43+1"
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version = "1.6.44+0"
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[[libsixel_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "libpng_jll"]
|
||||
git-tree-sha1 = "d4f63314c8aa1e48cd22aa0c17ed76cd1ae48c3c"
|
||||
git-tree-sha1 = "7dfa0fd9c783d3d0cc43ea1af53d69ba45c447df"
|
||||
uuid = "075b6546-f08a-558a-be8f-8157d0f608a5"
|
||||
version = "1.10.3+0"
|
||||
version = "1.10.3+1"
|
||||
|
||||
[[libsodium_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
|
||||
git-tree-sha1 = "848ab3d00fe39d6fbc2a8641048f8f272af1c51e"
|
||||
git-tree-sha1 = "f76d682d87eefadd3f165d8d9fda436464213142"
|
||||
uuid = "a9144af2-ca23-56d9-984f-0d03f7b5ccf8"
|
||||
version = "1.0.20+0"
|
||||
version = "1.0.20+1"
|
||||
|
||||
[[libvorbis_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]
|
||||
|
|
Loading…
Reference in a new issue