mirror of
https://github.com/MillironX/docker-BioJulia.git
synced 2024-12-22 01:18:17 +00:00
[⚡ AUTOMATED]: Pkg upgrade for 2023-08-16
Files changed:\nM Manifest.toml
This commit is contained in:
MillironX
parent
87209ffbc7
commit
7517187f3a
1 changed files with 62 additions and 62 deletions
124
Manifest.toml
124
Manifest.toml
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@ -82,10 +82,10 @@ uuid = "15f4f7f2-30c1-5605-9d31-71845cf9641f"
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version = "0.2.0"
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[[Automa]]
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deps = ["ScanByte", "TranscodingStreams"]
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git-tree-sha1 = "48e54446df62fdf9ef76959c32dc33f3cff659ee"
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deps = ["TranscodingStreams"]
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git-tree-sha1 = "ef9997b3d5547c48b41c7bd8899e812a917b409d"
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uuid = "67c07d97-cdcb-5c2c-af73-a7f9c32a568b"
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version = "0.8.3"
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version = "0.8.4"
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[[AxisAlgorithms]]
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deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"]
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@ -119,9 +119,9 @@ version = "0.3.2"
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[[BandedMatrices]]
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deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools", "SparseArrays"]
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git-tree-sha1 = "3cddbe0fad23df52587e675b3d71eea66b850cb9"
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git-tree-sha1 = "6e9b384d5e21452bc81cae3552c74f430e320985"
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uuid = "aae01518-5342-5314-be14-df237901396f"
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version = "0.17.34"
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version = "0.17.35"
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[[Base64]]
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uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
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@ -193,9 +193,9 @@ uuid = "764a87c0-6b3e-53db-9096-fe964310641d"
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version = "2.11.0"
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[[BufferedStreams]]
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git-tree-sha1 = "5bcb75a2979e40b29eb250cb26daab67aa8f97f5"
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git-tree-sha1 = "4ae47f9a4b1dc19897d3743ff13685925c5202ec"
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uuid = "e1450e63-4bb3-523b-b2a4-4ffa8c0fd77d"
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version = "1.2.0"
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version = "1.2.1"
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[[BusinessDays]]
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deps = ["Dates"]
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@ -282,9 +282,9 @@ version = "0.14.4"
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[[CodeTracking]]
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deps = ["InteractiveUtils", "UUIDs"]
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git-tree-sha1 = "d730914ef30a06732bdd9f763f6cc32e92ffbff1"
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git-tree-sha1 = "a1296f0fe01a4c3f9bf0dc2934efbf4416f5db31"
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uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2"
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version = "1.3.1"
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version = "1.3.4"
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[[CodecBase]]
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deps = ["TranscodingStreams"]
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@ -330,9 +330,9 @@ version = "0.4.0"
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[[ColorSchemes]]
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deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"]
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git-tree-sha1 = "dd3000d954d483c1aad05fe1eb9e6a715c97013e"
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git-tree-sha1 = "d9a8f86737b665e15a9641ecbac64deef9ce6724"
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uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4"
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version = "3.22.0"
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version = "3.23.0"
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[[ColorTypes]]
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deps = ["FixedPointNumbers", "Random"]
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@ -370,9 +370,9 @@ version = "0.3.0"
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[[Compat]]
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deps = ["Dates", "LinearAlgebra", "UUIDs"]
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git-tree-sha1 = "5ce999a19f4ca23ea484e92a1774a61b8ca4cf8e"
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git-tree-sha1 = "e460f044ca8b99be31d35fe54fc33a5c33dd8ed7"
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uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
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version = "4.8.0"
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version = "4.9.0"
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[[CompilerSupportLibraries_jll]]
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deps = ["Artifacts", "Libdl"]
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@ -441,9 +441,9 @@ version = "1.6.1"
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[[DataStructures]]
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deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
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git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4"
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git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d"
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uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
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version = "0.18.14"
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version = "0.18.15"
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[[DataValueInterfaces]]
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git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
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@ -484,9 +484,9 @@ version = "0.4.0"
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[[DiffEqBase]]
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deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
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git-tree-sha1 = "c5692436e7f8279503466db216c74165d1b301e4"
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git-tree-sha1 = "5f9126d4fb0a114ef122610a902f23736e90e93c"
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uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
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version = "6.127.0"
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version = "6.128.1"
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[[DiffEqCallbacks]]
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deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
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@ -535,10 +535,10 @@ deps = ["Random", "Serialization", "Sockets"]
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uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
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[[Distributions]]
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deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"]
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git-tree-sha1 = "e76a3281de2719d7c81ed62c6ea7057380c87b1d"
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deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"]
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git-tree-sha1 = "938fe2981db009f531b6332e31c58e9584a2f9bd"
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uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
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version = "0.25.98"
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version = "0.25.100"
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[[DocStringExtensions]]
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deps = ["LibGit2"]
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@ -684,9 +684,9 @@ version = "0.4.2"
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[[ForwardDiff]]
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deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"]
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git-tree-sha1 = "00e252f4d706b3d55a8863432e742bf5717b498d"
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git-tree-sha1 = "cf0fe81336da9fb90944683b8c41984b08793dad"
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uuid = "f6369f11-7733-5829-9624-2563aa707210"
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version = "0.10.35"
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version = "0.10.36"
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[[FreeType2_jll]]
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deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"]
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@ -858,9 +858,9 @@ version = "0.5.2"
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[[HostCPUFeatures]]
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deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"]
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git-tree-sha1 = "d38bd0d9759e3c6cfa19bdccc314eccf8ce596cc"
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git-tree-sha1 = "eb8fed28f4994600e29beef49744639d985a04b2"
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uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0"
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version = "0.1.15"
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version = "0.1.16"
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[[HypergeometricFunctions]]
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deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
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@ -1033,9 +1033,9 @@ version = "0.1.5"
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[[IntelOpenMP_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
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git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83"
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git-tree-sha1 = "ad37c091f7d7daf900963171600d7c1c5c3ede32"
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uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0"
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version = "2023.1.0+0"
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version = "2023.2.0+0"
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[[Interact]]
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deps = ["CSSUtil", "InteractBase", "JSON", "Knockout", "Observables", "OrderedCollections", "Reexport", "WebIO", "Widgets"]
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@ -1134,9 +1134,9 @@ version = "0.21.4"
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[[JSON3]]
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deps = ["Dates", "Mmap", "Parsers", "PrecompileTools", "StructTypes", "UUIDs"]
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git-tree-sha1 = "5b62d93f2582b09e469b3099d839c2d2ebf5066d"
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git-tree-sha1 = "95220473901735a0f4df9d1ca5b171b568b2daa3"
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uuid = "0f8b85d8-7281-11e9-16c2-39a750bddbf1"
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version = "1.13.1"
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version = "1.13.2"
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[[JavaCall]]
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deps = ["DataStructures", "Dates", "Libdl", "WinReg"]
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@ -1158,9 +1158,9 @@ version = "2.1.91+0"
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[[JuliaInterpreter]]
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deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"]
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git-tree-sha1 = "6a125e6a4cb391e0b9adbd1afa9e771c2179f8ef"
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git-tree-sha1 = "e8ab063deed72e14666f9d8af17bd5f9eab04392"
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uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a"
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version = "0.9.23"
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version = "0.9.24"
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[[JuliaWebAPI]]
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deps = ["Base64", "HTTP", "JSON", "Serialization", "Sockets", "ZMQ"]
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@ -1200,9 +1200,9 @@ version = "0.2.6"
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[[Krylov]]
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deps = ["LinearAlgebra", "Printf", "SparseArrays"]
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git-tree-sha1 = "6dc4ad9cd74ad4ca0a8e219e945dbd22039f2125"
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git-tree-sha1 = "fbda7c58464204d92f3b158578fb0b3d4224cea5"
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uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
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version = "0.9.2"
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version = "0.9.3"
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[[LAME_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
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@ -1374,10 +1374,10 @@ deps = ["Libdl"]
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uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
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[[LinearSolve]]
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deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
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git-tree-sha1 = "d2605a42d5453f510ca0fe37eff8aa0bfc5a3c80"
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deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
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git-tree-sha1 = "f746a5b9522815bf098049f9cbfbfcae53f29450"
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uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
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version = "2.4.2"
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version = "2.5.0"
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[[LittleCMS_jll]]
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deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg"]
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@ -1408,9 +1408,9 @@ version = "1.9.3+0"
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[[MKL_jll]]
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deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"]
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git-tree-sha1 = "154d7aaa82d24db6d8f7e4ffcfe596f40bff214b"
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git-tree-sha1 = "eb006abbd7041c28e0d16260e50a24f8f9104913"
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uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7"
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version = "2023.1.0+0"
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version = "2023.2.0+0"
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[[MLBase]]
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deps = ["IterTools", "Random", "Reexport", "StatsBase"]
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@ -1432,9 +1432,9 @@ version = "0.5.10"
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[[MakieCore]]
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deps = ["Observables"]
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git-tree-sha1 = "87a85ff81583bd392642869557cb633532989517"
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git-tree-sha1 = "f56b09c8b964919373d61750c6d8d4d2c602a2be"
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uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b"
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version = "0.6.4"
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version = "0.6.5"
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[[ManualMemory]]
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git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd"
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@ -1673,9 +1673,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
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[[OpenSSL_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl"]
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git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5"
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git-tree-sha1 = "bbb5c2115d63c2f1451cb70e5ef75e8fe4707019"
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uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95"
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version = "1.1.21+0"
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version = "1.1.22+0"
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[[OpenSpecFun_jll]]
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deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"]
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@ -1730,9 +1730,9 @@ version = "0.4.0"
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[[PackageExtensionCompat]]
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deps = ["Requires", "TOML"]
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git-tree-sha1 = "32f3d52212a8d1c5d589a58851b1f04c97339110"
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git-tree-sha1 = "f9b1e033c2b1205cf30fd119f4e50881316c1923"
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uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930"
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version = "1.0.0"
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version = "1.0.1"
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[[PaddedViews]]
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deps = ["OffsetArrays"]
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@ -1909,9 +1909,9 @@ version = "1.7.2"
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[[ProtoBuf]]
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deps = ["BufferedStreams", "Dates", "EnumX", "TOML", "TranscodingStreams"]
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git-tree-sha1 = "e957b28fc98ecd13da4f2bdc7e121832e5d18e3e"
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git-tree-sha1 = "1a1c06cf81fc5f979c0c4a5aa1e5647dca4f5ddc"
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uuid = "3349acd9-ac6a-5e09-bcdb-63829b23a429"
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version = "1.0.11"
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version = "1.0.12"
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[[QOI]]
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deps = ["ColorTypes", "FileIO", "FixedPointNumbers"]
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@ -1999,10 +1999,10 @@ uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
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version = "2.38.7"
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[[RecursiveFactorization]]
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deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"]
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git-tree-sha1 = "9088515ad915c99026beb5436d0a09cd8c18163e"
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deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "PrecompileTools", "StrideArraysCore", "TriangularSolve"]
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git-tree-sha1 = "2b6d4a40339aa02655b1743f4cd7c03109f520c1"
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uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4"
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version = "0.2.18"
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version = "0.2.20"
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[[Reexport]]
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git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b"
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@ -2047,9 +2047,9 @@ version = "0.4.0+0"
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[[Roots]]
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deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"]
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git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4"
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git-tree-sha1 = "ff42754a57bb0d6dcfe302fd0d4272853190421f"
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uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665"
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version = "2.0.17"
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version = "2.0.19"
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[[Rotations]]
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deps = ["LinearAlgebra", "Quaternions", "Random", "StaticArrays"]
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@ -2059,9 +2059,9 @@ version = "1.5.1"
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[[RuntimeGeneratedFunctions]]
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deps = ["ExprTools", "SHA", "Serialization"]
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git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf"
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git-tree-sha1 = "6aacc5eefe8415f47b3e34214c1d79d2674a0ba2"
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uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47"
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version = "0.5.11"
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version = "0.5.12"
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[[SHA]]
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uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
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@ -2217,9 +2217,9 @@ version = "0.3.9"
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[[SpecialFunctions]]
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deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
|
||||
git-tree-sha1 = "7beb031cf8145577fbccacd94b8a8f4ce78428d3"
|
||||
git-tree-sha1 = "e2cfc4012a19088254b3950b85c3c1d8882d864d"
|
||||
uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
|
||||
version = "2.3.0"
|
||||
version = "2.3.1"
|
||||
|
||||
[[StackViews]]
|
||||
deps = ["OffsetArrays"]
|
||||
|
|
@ -2486,9 +2486,9 @@ uuid = "75842c30-9b2d-11e9-3f58-f17fe2b89951"
|
|||
version = "0.2.0"
|
||||
|
||||
[[URIs]]
|
||||
git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a"
|
||||
git-tree-sha1 = "b7a5e99f24892b6824a954199a45e9ffcc1c70f0"
|
||||
uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
|
||||
version = "1.4.2"
|
||||
version = "1.5.0"
|
||||
|
||||
[[UUIDs]]
|
||||
deps = ["Random", "SHA"]
|
||||
|
|
@ -2516,9 +2516,9 @@ version = "3.6.0"
|
|||
|
||||
[[Unitful]]
|
||||
deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"]
|
||||
git-tree-sha1 = "786e80c8ae3ed0c69b2e9799dac321d2cdbccd89"
|
||||
git-tree-sha1 = "607c142139151faa591b5e80d8055a15e487095b"
|
||||
uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
|
||||
version = "1.16.0"
|
||||
version = "1.16.3"
|
||||
|
||||
[[UnitfulLatexify]]
|
||||
deps = ["LaTeXStrings", "Latexify", "Unitful"]
|
||||
|
|
@ -2634,9 +2634,9 @@ version = "1.1.34+0"
|
|||
|
||||
[[XZ_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl"]
|
||||
git-tree-sha1 = "2222b751598bd9f4885c9ce9cd23e83404baa8ce"
|
||||
git-tree-sha1 = "cf2c7de82431ca6f39250d2fc4aacd0daa1675c0"
|
||||
uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800"
|
||||
version = "5.4.3+1"
|
||||
version = "5.4.4+0"
|
||||
|
||||
[[Xorg_libX11_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"]
|
||||
|
|
@ -2794,9 +2794,9 @@ version = "1.5.5+0"
|
|||
|
||||
[[Zygote]]
|
||||
deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"]
|
||||
git-tree-sha1 = "5be3ddb88fc992a7d8ea96c3f10a49a7e98ebc7b"
|
||||
git-tree-sha1 = "e2fe78907130b521619bc88408c859a472c4172b"
|
||||
uuid = "e88e6eb3-aa80-5325-afca-941959d7151f"
|
||||
version = "0.6.62"
|
||||
version = "0.6.63"
|
||||
|
||||
[[ZygoteRules]]
|
||||
deps = ["ChainRulesCore", "MacroTools"]
|
||||
|
|
|
|||
Loading…
Reference in a new issue