millironx/docker-BioJulia
1
0
Fork 0
mirror of https://github.com/MillironX/docker-BioJulia.git synced 2024-11-21 06:26:05 +00:00
Code Issues Releases Packages Activity

[⚡ AUTOMATED]: Pkg upgrade for 2023-12-02

Browse source 
Files changed:\nM	Manifest.toml
This commit is contained in:
MillironX 2023-12-02 01:33:47 +00:00
parent aa07a0a6d1
commit d3673e20b1
1 changed files with 55 additions and 55 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

110
Manifest.toml
View file

@ -365,9 +365,9 @@ version = "0.3.0"
[[Compat]]
deps = ["Dates", "LinearAlgebra", "UUIDs"]
git-tree-sha1 = "8a62af3e248a8c4bad6b32cbbe663ae02275e32c"
git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "4.10.0"
version = "4.10.1"
[[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"]
@ -490,9 +490,9 @@ version = "6.130.0"
[[DiffEqCallbacks]]
deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
git-tree-sha1 = "6cb07ea2557f425a5464ab1bd21c50464368c1a2"
git-tree-sha1 = "4e4de57a0ac47b2f20aae62f132355b058e9f0cd"
uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
version = "2.33.1"
version = "2.34.0"
[[DiffEqNoiseProcess]]
deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"]
@ -526,9 +526,9 @@ version = "3.2.3"
[[Distances]]
deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "5225c965635d8c21168e32a12954675e7bea1151"
git-tree-sha1 = "66c4c81f259586e8f002eacebc177e1fb06363b0"
uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
version = "0.10.10"
version = "0.10.11"
[[Distributed]]
deps = ["Random", "Serialization", "Sockets"]
@ -563,9 +563,9 @@ version = "1.0.4"
[[EnzymeCore]]
deps = ["Adapt"]
git-tree-sha1 = "ab81396e4e7b61f5590db02fa1c17fae4f16d7ab"
git-tree-sha1 = "2efe862de93cd87f620ad6ac9c9e3f83f1b2841b"
uuid = "f151be2c-9106-41f4-ab19-57ee4f262869"
version = "0.6.3"
version = "0.6.4"
[[EpollShim_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
@ -665,10 +665,10 @@ version = "0.9.21"
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
[[FillArrays]]
deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"]
git-tree-sha1 = "35f0c0f345bff2c6d636f95fdb136323b5a796ef"
deps = ["LinearAlgebra", "PDMats", "Random", "SparseArrays", "Statistics"]
git-tree-sha1 = "28e4e9c4b7b162398ec8004bdabe9a90c78c122d"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "1.7.0"
version = "1.8.0"
[[FiniteDiff]]
deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"]
@ -1128,9 +1128,9 @@ version = "0.4.38"
[[JLFzf]]
deps = ["Pipe", "REPL", "Random", "fzf_jll"]
git-tree-sha1 = "9fb0b890adab1c0a4a475d4210d51f228bfc250d"
git-tree-sha1 = "a53ebe394b71470c7f97c2e7e170d51df21b17af"
uuid = "1019f520-868f-41f5-a6de-eb00f4b6a39c"
version = "0.1.6"
version = "0.1.7"
[[JLLWrappers]]
deps = ["Artifacts", "Preferences"]
@ -1176,9 +1176,9 @@ version = "2.1.91+0"
[[JuliaInterpreter]]
deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"]
git-tree-sha1 = "0592b1810613d1c95eeebcd22dc11fba186c2a57"
git-tree-sha1 = "e49bce680c109bc86e3e75ebcb15040d6ad9e1d3"
uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a"
version = "0.9.26"
version = "0.9.27"
[[JuliaWebAPI]]
deps = ["Base64", "HTTP", "JSON", "Serialization", "Sockets", "ZMQ"]
@ -1377,9 +1377,9 @@ version = "1.3.5"
[[LightXML]]
deps = ["Libdl", "XML2_jll"]
git-tree-sha1 = "e129d9391168c677cd4800f5c0abb1ed8cb3794f"
git-tree-sha1 = "3a994404d3f6709610701c7dabfc03fed87a81f8"
uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179"
version = "0.9.0"
version = "0.9.1"
[[LineSearches]]
deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"]
@ -1450,9 +1450,9 @@ version = "0.5.11"
[[MakieCore]]
deps = ["Observables", "REPL"]
git-tree-sha1 = "9b11acd07f21c4d035bd4156e789532e8ee2cc70"
git-tree-sha1 = "e81e6f1e8a0e96bf2bf267e4bf7f94608bf09b5c"
uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b"
version = "0.6.9"
version = "0.7.1"
[[ManualMemory]]
git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd"
@ -1476,9 +1476,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
[[MathOptInterface]]
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"]
git-tree-sha1 = "70ea2892b8bfffecc0387ba1a6a21192814f120c"
git-tree-sha1 = "362ae34a5291a79e16b8eb87b5738532c5e799ff"
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
version = "1.22.0"
version = "1.23.0"
[[MathProgBase]]
deps = ["LinearAlgebra", "SparseArrays"]
@ -1488,9 +1488,9 @@ version = "0.7.8"
[[MbedTLS]]
deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"]
git-tree-sha1 = "f512dc13e64e96f703fd92ce617755ee6b5adf0f"
git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf"
uuid = "739be429-bea8-5141-9913-cc70e7f3736d"
version = "1.1.8"
version = "1.1.9"
[[MbedTLS_jll]]
deps = ["Artifacts", "Libdl"]
@ -1556,9 +1556,9 @@ version = "1.0.19"
[[MutableArithmetics]]
deps = ["LinearAlgebra", "SparseArrays", "Test"]
git-tree-sha1 = "6985021d02ab8c509c841bb8b2becd3145a7b490"
git-tree-sha1 = "806eea990fb41f9b36f1253e5697aa645bf6a9f8"
uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
version = "1.3.3"
version = "1.4.0"
[[MyterialColors]]
git-tree-sha1 = "01d8466fb449436348999d7c6ad740f8f853a579"
@ -1714,9 +1714,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372"
version = "1.3.2+0"
[[OrderedCollections]]
git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3"
git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.6.2"
version = "1.6.3"
[[OrdinaryDiffEq]]
deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
@ -1730,9 +1730,9 @@ uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15"
[[PDMats]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "f6f85a2edb9c356b829934ad3caed2ad0ebbfc99"
git-tree-sha1 = "4e5be6bb265d33669f98eb55d2a57addd1eeb72c"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.11.29"
version = "0.11.30"
[[PGFPlots]]
deps = ["ColorBrewer", "ColorSchemes", "Colors", "Contour", "DataFrames", "DelimitedFiles", "Discretizers", "Distributed", "ImageMagick", "Images", "Printf", "Requires", "StatsBase", "TikzPictures"]
@ -1742,9 +1742,9 @@ version = "3.4.3"
[[PNGFiles]]
deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"]
git-tree-sha1 = "5ded86ccaf0647349231ed6c0822c10886d4a1ee"
git-tree-sha1 = "eed372b0fa15624273a9cdb188b1b88476e6a233"
uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883"
version = "0.4.1"
version = "0.4.2"
[[PackageExtensionCompat]]
deps = ["Requires", "TOML"]
@ -1841,9 +1841,9 @@ version = "0.2.1"
[[Polynomials]]
deps = ["LinearAlgebra", "MakieCore", "RecipesBase", "Setfield", "SparseArrays"]
git-tree-sha1 = "5a95b69396b77fdb2c48970a535610c4743810e2"
git-tree-sha1 = "a9c7a523d5ed375be3983db190f6a5874ae9286d"
uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
version = "4.0.5"
version = "4.0.6"
[[PooledArrays]]
deps = ["DataAPI", "Future"]
@ -1895,9 +1895,9 @@ version = "1.4.1"
[[PrettyTables]]
deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"]
git-tree-sha1 = "3f43c2aae6aa4a2503b05587ab74f4f6aeff9fd0"
git-tree-sha1 = "88b895d13d53b5577fd53379d913b9ab9ac82660"
uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
version = "2.3.0"
version = "2.3.1"
[[Primes]]
deps = ["IntegerMathUtils"]
@ -1957,9 +1957,9 @@ version = "0.16.5"
[[Quaternions]]
deps = ["LinearAlgebra", "Random", "RealDot"]
git-tree-sha1 = "da095158bdc8eaccb7890f9884048555ab771019"
git-tree-sha1 = "9a46862d248ea548e340e30e2894118749dc7f51"
uuid = "94ee1d12-ae83-5a48-8b1c-48b8ff168ae0"
version = "0.7.4"
version = "0.7.5"
[[REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
@ -2217,9 +2217,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
[[SparseDiffTools]]
deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"]
git-tree-sha1 = "49068dceed7febe32afe2d7b874172a7c3198cb3"
git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5"
uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804"
version = "2.12.0"
version = "2.13.0"
[[SparseInverseSubset]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
@ -2258,10 +2258,10 @@ uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718"
version = "1.4.1"
[[StaticArrays]]
deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"]
git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2"
deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore", "Statistics"]
git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87"
uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "1.6.5"
version = "1.7.0"
[[StaticArraysCore]]
git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d"
@ -2322,9 +2322,9 @@ version = "1.0.1"
[[StrideArraysCore]]
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"]
git-tree-sha1 = "e7dd250422df290cee14960c1ee144b44ac3dd77"
git-tree-sha1 = "d6415f66f3d89c615929af907fdc6a3e17af0d8c"
uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da"
version = "0.5.1"
version = "0.5.2"
[[StringEncodings]]
deps = ["Libiconv_jll"]
@ -2535,9 +2535,9 @@ version = "3.6.0"
[[Unitful]]
deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"]
git-tree-sha1 = "242982d62ff0d1671e9029b52743062739255c7e"
git-tree-sha1 = "3c793be6df9dd77a0cf49d80984ef9ff996948fa"
uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
version = "1.18.0"
version = "1.19.0"
[[UnitfulLatexify]]
deps = ["LaTeXStrings", "Latexify", "Unitful"]
@ -2558,9 +2558,9 @@ version = "0.5.5"
[[VectorizationBase]]
deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"]
git-tree-sha1 = "b182207d4af54ac64cbc71797765068fdeff475d"
git-tree-sha1 = "7209df901e6ed7489fe9b7aa3e46fb788e15db85"
uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f"
version = "0.21.64"
version = "0.21.65"
[[VertexSafeGraphs]]
deps = ["Graphs"]
@ -2612,9 +2612,9 @@ version = "0.3.1"
[[WoodburyMatrices]]
deps = ["LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3"
git-tree-sha1 = "5f24e158cf4cee437052371455fe361f526da062"
uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6"
version = "0.5.5"
version = "0.5.6"
[[WordTokenizers]]
deps = ["DataDeps", "HTML_Entities", "StrTables", "Unicode"]
@ -2635,9 +2635,9 @@ version = "0.3.1"
[[XML2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916"
git-tree-sha1 = "da69178aacc095066bad1f69d2f59a60a1dd8ad1"
uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
version = "2.11.5+0"
version = "2.12.0+0"
[[XMLDict]]
deps = ["EzXML", "IterTools", "OrderedCollections"]
@ -2824,10 +2824,10 @@ uuid = "700de1a5-db45-46bc-99cf-38207098b444"
version = "0.2.4"
[[fzf_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "47cf33e62e138b920039e8ff9f9841aafe1b733e"
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "a68c9655fbe6dfcab3d972808f1aafec151ce3f8"
uuid = "214eeab7-80f7-51ab-84ad-2988db7cef09"
version = "0.35.1+0"
version = "0.43.0+0"
[[libaom_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]