millironx
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docker-BioJulia
mirror of https://github.com/MillironX/docker-BioJulia
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[⚡ AUTOMATED]: Pkg upgrade for 2024-04-16

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Files changed:\nM	Manifest.toml
master 1.6.7-3.1.6-e84424c
MillironX 2 weeks ago
parent b235e2adf3
commit e84424cff7
1 changed files with 36 additions and 36 deletions
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72
Manifest.toml
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@ -63,9 +63,9 @@ version = "7.5.1"
[[ArrayLayouts]]
deps = ["FillArrays", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "6404a564c24a994814106c374bec893195e19bac"
git-tree-sha1 = "33207a8be6267bc389d0701e97a9bce6a4de68eb"
uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
version = "1.8.0"
version = "1.9.2"
[[Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
@ -229,9 +229,9 @@ version = "0.1.1"
[[CSV]]
deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"]
git-tree-sha1 = "a44910ceb69b0d44fe262dd451ab11ead3ed0be8"
git-tree-sha1 = "6c834533dc1fabd820c1db03c839bf97e45a3fab"
uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
version = "0.10.13"
version = "0.10.14"
[[Cairo_jll]]
deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"]
@ -337,9 +337,9 @@ version = "3.24.0"
[[ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
git-tree-sha1 = "eb7f0f8307f71fac7c606984ea5fb2817275d6e4"
git-tree-sha1 = "b10d0b65641d57b8b4d5e234446582de5047050d"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.11.4"
version = "0.11.5"
[[ColorVectorSpace]]
deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"]
@ -401,9 +401,9 @@ uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9"
version = "1.5.5"
[[Contour]]
git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781"
git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8"
uuid = "d38c429a-6771-53c6-b99e-75d170b6e991"
version = "0.6.2"
version = "0.6.3"
[[CoordinateTransformations]]
deps = ["LinearAlgebra", "StaticArrays"]
@ -452,9 +452,9 @@ version = "1.6.1"
[[DataStructures]]
deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "0f4b5d62a88d8f59003e43c25a8a90de9eb76317"
git-tree-sha1 = "97d79461925cdb635ee32116978fc735b9463a39"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.18.18"
version = "0.18.19"
[[DataValueInterfaces]]
git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
@ -676,10 +676,10 @@ version = "0.9.21"
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
[[FillArrays]]
deps = ["LinearAlgebra", "PDMats", "Random", "SparseArrays", "Statistics"]
git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1"
deps = ["LinearAlgebra", "PDMats", "SparseArrays", "Statistics"]
git-tree-sha1 = "bfe82a708416cf00b73a3198db0859c82f741558"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "1.9.3"
version = "1.10.0"
[[FiniteDiff]]
deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"]
@ -742,9 +742,9 @@ version = "0.5.0"
[[Functors]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "8ae30e786837ce0a24f5e2186938bf3251ab94b2"
git-tree-sha1 = "d3e63d9fa13f8eaa2f06f64949e2afc593ff52c2"
uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196"
version = "0.4.8"
version = "0.4.10"
[[Future]]
deps = ["Random"]
@ -1036,9 +1036,9 @@ version = "0.10.1"
[[Images]]
deps = ["Base64", "FileIO", "Graphics", "ImageAxes", "ImageBase", "ImageBinarization", "ImageContrastAdjustment", "ImageCore", "ImageCorners", "ImageDistances", "ImageFiltering", "ImageIO", "ImageMagick", "ImageMetadata", "ImageMorphology", "ImageQualityIndexes", "ImageSegmentation", "ImageShow", "ImageTransformations", "IndirectArrays", "IntegralArrays", "Random", "Reexport", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "TiledIteration"]
git-tree-sha1 = "d438268ed7a665f8322572be0dabda83634d5f45"
git-tree-sha1 = "12fdd617c7fe25dc4a6cc804d657cc4b2230302b"
uuid = "916415d5-f1e6-5110-898d-aaa5f9f070e0"
version = "0.26.0"
version = "0.26.1"
[[Imath_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
@ -1511,9 +1511,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
[[MathOptInterface]]
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"]
git-tree-sha1 = "d268e82322cc5df142a3664d03d59adecd53abf9"
git-tree-sha1 = "0958279282984a89e087fca415f01bee443154d5"
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
version = "1.27.1"
version = "1.28.1"
[[MbedTLS]]
deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"]
@ -1538,9 +1538,9 @@ version = "0.7.2"
[[Missings]]
deps = ["DataAPI"]
git-tree-sha1 = "f66bdc5de519e8f8ae43bdc598782d35a25b1272"
git-tree-sha1 = "ec4f7fbeab05d7747bdf98eb74d130a2a2ed298d"
uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
version = "1.1.0"
version = "1.2.0"
[[Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"
@ -1670,9 +1670,9 @@ version = "0.5.5"
[[OffsetArrays]]
deps = ["Adapt"]
git-tree-sha1 = "6a731f2b5c03157418a20c12195eb4b74c8f8621"
git-tree-sha1 = "e64b4f5ea6b7389f6f046d13d4896a8f9c1ba71e"
uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
version = "1.13.0"
version = "1.14.0"
[[Ogg_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@ -1731,10 +1731,10 @@ uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e"
version = "0.5.5+0"
[[Optim]]
deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "PackageExtensionCompat", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"]
git-tree-sha1 = "d1223e69af90b6d26cea5b6f3b289b3148ba702c"
deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"]
git-tree-sha1 = "d9b79c4eed437421ac4285148fcadf42e0700e89"
uuid = "429524aa-4258-5aef-a3af-852621145aeb"
version = "1.9.3"
version = "1.9.4"
[[Opus_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@ -1846,9 +1846,9 @@ version = "1.4.1"
[[Plots]]
deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"]
git-tree-sha1 = "3bdfa4fa528ef21287ef659a89d686e8a1bcb1a9"
git-tree-sha1 = "442e1e7ac27dd5ff8825c3fa62fbd1e86397974b"
uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
version = "1.40.3"
version = "1.40.4"
[[PoissonRandom]]
deps = ["Random"]
@ -2047,9 +2047,9 @@ version = "2.38.10"
[[RecursiveFactorization]]
deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "PrecompileTools", "StrideArraysCore", "TriangularSolve"]
git-tree-sha1 = "8bc86c78c7d8e2a5fe559e3721c0f9c9e303b2ed"
git-tree-sha1 = "c04dacfc546591d43c39dc529c922d6a06a5a694"
uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4"
version = "0.2.21"
version = "0.2.22"
[[Reexport]]
git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b"
@ -2350,10 +2350,10 @@ uuid = "9700d1a9-a7c8-5760-9816-a99fda30bb8f"
version = "1.0.1"
[[StrideArraysCore]]
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"]
git-tree-sha1 = "d6415f66f3d89c615929af907fdc6a3e17af0d8c"
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"]
git-tree-sha1 = "b518da45c50dfab8384125ba829f1739bda41034"
uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da"
version = "0.5.2"
version = "0.5.5"
[[StringEncodings]]
deps = ["Libiconv_jll"]
@ -2574,10 +2574,10 @@ uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d"
version = "0.1.2"
[[VariantCallFormat]]
deps = ["Automa", "BGZFStreams", "BioCore", "BufferedStreams"]
git-tree-sha1 = "f73ea34d3085cdbf6a18fa4c4b690e0f4a147730"
deps = ["Automa", "BGZFStreams", "BioGenerics", "BufferedStreams"]
git-tree-sha1 = "96fbe09c9e3b488666c883772fed8f6c1256c714"
uuid = "28eba6e3-a997-4ad9-87c6-d933b8bca6c1"
version = "0.5.5"
version = "0.5.6"
[[VectorizationBase]]
deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"]

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