mirror of
https://github.com/MillironX/docker-BioJulia.git
synced 2024-12-03 10:59:55 +00:00
[⚡ AUTOMATED]: Pkg upgrade for 2022-12-16
Files changed:\nM Manifest.toml
This commit is contained in:
MillironX
parent
c084b00c84
commit
f99fbd0309
1 changed files with 123 additions and 82 deletions
205
Manifest.toml
205
Manifest.toml
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@ -52,9 +52,9 @@ version = "6.0.24"
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[[ArrayInterfaceCore]]
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deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
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git-tree-sha1 = "c46fb7dd1d8ca1d213ba25848a5ec4e47a1a1b08"
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git-tree-sha1 = "badccc4459ffffb6bce5628461119b7057dec32c"
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uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2"
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version = "0.1.26"
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version = "0.1.27"
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[[ArrayInterfaceGPUArrays]]
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deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"]
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@ -82,9 +82,9 @@ version = "0.1.3"
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[[ArrayLayouts]]
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deps = ["FillArrays", "LinearAlgebra", "SparseArrays"]
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git-tree-sha1 = "2da56525d2d60e9b205c788e3b61b7aed5e721c6"
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git-tree-sha1 = "1cbe50e27f4df02b8eba54f10a76888b606c47b2"
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uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
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version = "0.8.15"
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version = "0.8.16"
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[[Artifacts]]
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uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
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@ -157,6 +157,12 @@ git-tree-sha1 = "b83f8ab279139bdd68b593bee5862fdb0b855b98"
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uuid = "9d649c22-cb6b-11e8-1fa9-f3896fced444"
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version = "0.1.0"
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[[BinaryProvider]]
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deps = ["Libdl", "Logging", "SHA"]
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git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058"
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uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232"
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version = "0.5.10"
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[[BioAlignments]]
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deps = ["BioGenerics", "BioSequences", "BioSymbols", "IntervalTrees", "LinearAlgebra"]
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git-tree-sha1 = "707e7e02cfb91a2b09e8f89df0204603b026df88"
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@ -240,10 +246,10 @@ uuid = "70588ee8-6100-5070-97c1-3cb50ed05fe8"
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version = "0.1.1"
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[[CSV]]
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deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"]
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git-tree-sha1 = "c5fd7cd27ac4aed0acf4b73948f0110ff2a854b2"
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deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "SnoopPrecompile", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"]
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git-tree-sha1 = "8c73e96bd6817c2597cfd5615b91fca5deccf1af"
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uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
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version = "0.10.7"
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version = "0.10.8"
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[[Cairo_jll]]
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deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"]
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@ -295,9 +301,9 @@ version = "0.14.3"
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[[CodeTracking]]
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deps = ["InteractiveUtils", "UUIDs"]
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git-tree-sha1 = "cc4bd91eba9cdbbb4df4746124c22c0832a460d6"
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git-tree-sha1 = "3bf60ba2fae10e10f70d53c070424e40a820dac2"
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uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2"
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version = "1.1.1"
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version = "1.1.2"
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[[CodecBase]]
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deps = ["TranscodingStreams"]
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@ -361,9 +367,9 @@ version = "0.9.9"
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[[Colors]]
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deps = ["ColorTypes", "FixedPointNumbers", "Reexport"]
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git-tree-sha1 = "417b0ed7b8b838aa6ca0a87aadf1bb9eb111ce40"
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git-tree-sha1 = "fc08e5930ee9a4e03f84bfb5211cb54e7769758a"
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uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
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version = "0.12.8"
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version = "0.12.10"
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[[Combinatorics]]
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git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860"
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@ -432,15 +438,21 @@ version = "1.0.2"
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[[DSP]]
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deps = ["Compat", "FFTW", "IterTools", "LinearAlgebra", "Polynomials", "Random", "Reexport", "SpecialFunctions", "Statistics"]
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git-tree-sha1 = "4ba2a190a9d05a36e8c26182eb1ba06cd12c1051"
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git-tree-sha1 = "da8b06f89fce9996443010ef92572b193f8dca1f"
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uuid = "717857b8-e6f2-59f4-9121-6e50c889abd2"
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version = "0.7.7"
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version = "0.7.8"
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[[DataAPI]]
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git-tree-sha1 = "e08915633fcb3ea83bf9d6126292e5bc5c739922"
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uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
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version = "1.13.0"
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[[DataDeps]]
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deps = ["BinaryProvider", "HTTP", "Libdl", "Reexport", "SHA", "p7zip_jll"]
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git-tree-sha1 = "e299d8267135ef2f9c941a764006697082c1e7e8"
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uuid = "124859b0-ceae-595e-8997-d05f6a7a8dfe"
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version = "0.7.8"
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[[DataFrames]]
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deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
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git-tree-sha1 = "d4f69885afa5e6149d0cab3818491565cf41446d"
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@ -476,15 +488,15 @@ version = "0.7.6"
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[[DecisionTree]]
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deps = ["AbstractTrees", "DelimitedFiles", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics"]
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git-tree-sha1 = "5ab40e9f5a554a642bc5ab1d20a198f76a1e6958"
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git-tree-sha1 = "cbf727a9d5fb18c73dc0cbd21a9c696540bf56ae"
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uuid = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb"
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version = "0.12.0"
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version = "0.12.1"
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[[DelayDiffEq]]
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deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "UnPack"]
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git-tree-sha1 = "86f442c42394975c71dc1ee116c7cfc410ebe828"
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git-tree-sha1 = "84f9dd68cfd04865e4d417a80a49fb046ad51135"
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uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb"
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version = "5.40.3"
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version = "5.40.4"
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[[DelimitedFiles]]
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deps = ["Mmap"]
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@ -497,10 +509,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d"
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version = "0.4.0"
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[[DiffEqBase]]
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deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"]
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git-tree-sha1 = "c6cdad9a11faf1da7602d46241fcb8b7deecdc7c"
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deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"]
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git-tree-sha1 = "82ca50c8e8b25d154378e826c11dead0b82b48cb"
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uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
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version = "6.109.0"
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version = "6.110.1"
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[[DiffEqCallbacks]]
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deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArrays"]
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@ -556,9 +568,9 @@ version = "0.25.79"
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[[DocStringExtensions]]
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deps = ["LibGit2"]
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git-tree-sha1 = "c36550cb29cbe373e95b3f40486b9a4148f89ffd"
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git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d"
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uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
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version = "0.9.2"
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version = "0.9.3"
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[[Downloads]]
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deps = ["ArgTools", "LibCURL", "NetworkOptions"]
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@ -647,9 +659,9 @@ version = "0.3.2"
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[[FastLapackInterface]]
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deps = ["LinearAlgebra"]
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git-tree-sha1 = "14a6f7a21125f715d935fe8f83560ee833f7d79d"
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git-tree-sha1 = "7fbaf9f73cd4c8561702ea9b16acf3f99d913fe4"
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uuid = "29a986be-02c6-4525-aec4-84b980013641"
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version = "1.2.7"
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version = "1.2.8"
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[[FileIO]]
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deps = ["Pkg", "Requires", "UUIDs"]
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@ -668,9 +680,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
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[[FillArrays]]
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deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"]
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git-tree-sha1 = "802bfc139833d2ba893dd9e62ba1767c88d708ae"
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git-tree-sha1 = "9a0472ec2f5409db243160a8b030f94c380167a3"
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uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
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version = "0.13.5"
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version = "0.13.6"
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[[FiniteDiff]]
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deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"]
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@ -698,9 +710,9 @@ version = "0.4.2"
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[[ForwardDiff]]
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deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"]
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git-tree-sha1 = "10fa12fe96e4d76acfa738f4df2126589a67374f"
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git-tree-sha1 = "a69dd6db8a809f78846ff259298678f0d6212180"
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uuid = "f6369f11-7733-5829-9624-2563aa707210"
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version = "0.10.33"
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version = "0.10.34"
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[[FreeType]]
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deps = ["CEnum", "FreeType2_jll"]
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@ -807,9 +819,9 @@ version = "0.21.0+0"
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[[Glib_jll]]
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deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Pkg", "Zlib_jll"]
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git-tree-sha1 = "fb83fbe02fe57f2c068013aa94bcdf6760d3a7a7"
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git-tree-sha1 = "d3b3624125c1474292d0d8ed0f65554ac37ddb23"
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uuid = "7746bdde-850d-59dc-9ae8-88ece973131d"
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version = "2.74.0+1"
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version = "2.74.0+2"
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[[Graphics]]
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deps = ["Colors", "LinearAlgebra", "NaNMath"]
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@ -846,6 +858,12 @@ git-tree-sha1 = "29070dee9df18d9565276d68a596854b1764aa38"
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uuid = "528830af-5a63-567c-a44a-034ed33b8444"
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version = "0.10.2+0"
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[[HTML_Entities]]
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deps = ["StrTables"]
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git-tree-sha1 = "c4144ed3bc5f67f595622ad03c0e39fa6c70ccc7"
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uuid = "7693890a-d069-55fe-a829-b4a6d304f0ee"
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version = "1.0.1"
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[[HTTP]]
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deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"]
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git-tree-sha1 = "0fa77022fe4b511826b39c894c90daf5fce3334a"
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@ -1057,15 +1075,15 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
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[[Interpolations]]
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deps = ["Adapt", "AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"]
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git-tree-sha1 = "842dd89a6cb75e02e85fdd75c760cdc43f5d6863"
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git-tree-sha1 = "721ec2cf720536ad005cb38f50dbba7b02419a15"
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uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
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version = "0.14.6"
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version = "0.14.7"
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[[IntervalSets]]
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deps = ["Dates", "Random", "Statistics"]
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git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6"
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git-tree-sha1 = "3f91cd3f56ea48d4d2a75c2a65455c5fc74fa347"
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uuid = "8197267c-284f-5f27-9208-e0e47529a953"
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version = "0.7.4"
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version = "0.7.3"
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[[IntervalTrees]]
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deps = ["InteractiveUtils", "Profile", "Random", "Test"]
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@ -1167,9 +1185,9 @@ version = "2.1.2+0"
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[[JuliaInterpreter]]
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deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"]
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git-tree-sha1 = "a79c4cf60cc7ddcdcc70acbb7216a5f9b4f8d188"
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git-tree-sha1 = "847da597e4271c88bb54b8c7dfbeac44ea85ace4"
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uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a"
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version = "0.9.16"
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version = "0.9.18"
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[[JuliaWebAPI]]
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deps = ["Base64", "HTTP", "JSON", "Serialization", "Sockets", "ZMQ"]
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@ -1326,9 +1344,9 @@ version = "1.42.0+0"
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[[Libiconv_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
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git-tree-sha1 = "42b62845d70a619f063a7da093d995ec8e15e778"
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git-tree-sha1 = "c7cb1f5d892775ba13767a87c7ada0b980ea0a71"
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uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531"
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version = "1.16.1+1"
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version = "1.16.1+2"
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[[Libmount_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
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@ -1693,9 +1711,9 @@ version = "1.4.1"
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[[OrdinaryDiffEq]]
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deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "ArrayInterfaceStaticArraysCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
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git-tree-sha1 = "cfb874fa0336429cd6a057be0b1de1f125048c8c"
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git-tree-sha1 = "092a810f0028a3296991780dd74d9a805797efa4"
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uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
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version = "6.35.0"
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version = "6.35.1"
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[[PCRE2_jll]]
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deps = ["Artifacts", "Libdl"]
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@ -1739,9 +1757,9 @@ version = "2.1.1"
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[[Parsers]]
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deps = ["Dates", "SnoopPrecompile"]
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git-tree-sha1 = "b64719e8b4504983c7fca6cc9db3ebc8acc2a4d6"
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git-tree-sha1 = "6466e524967496866901a78fca3f2e9ea445a559"
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uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
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version = "2.5.1"
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version = "2.5.2"
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[[Pidfile]]
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deps = ["FileWatching", "Test"]
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@ -1778,15 +1796,15 @@ version = "3.1.0"
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[[PlotUtils]]
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deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"]
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git-tree-sha1 = "21303256d239f6b484977314674aef4bb1fe4420"
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git-tree-sha1 = "5b7690dd212e026bbab1860016a6601cb077ab66"
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uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043"
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version = "1.3.1"
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version = "1.3.2"
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[[Plots]]
|
||||
deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"]
|
||||
git-tree-sha1 = "6a9521b955b816aa500462951aa67f3e4467248a"
|
||||
deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"]
|
||||
git-tree-sha1 = "dadd6e31706ec493192a70a7090d369771a9a22a"
|
||||
uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
|
||||
version = "1.36.6"
|
||||
version = "1.37.2"
|
||||
|
||||
[[PoissonRandom]]
|
||||
deps = ["Random"]
|
||||
|
|
@ -1844,9 +1862,9 @@ version = "0.2.4"
|
|||
|
||||
[[PreallocationTools]]
|
||||
deps = ["Adapt", "ArrayInterfaceCore", "ForwardDiff"]
|
||||
git-tree-sha1 = "3953d18698157e1d27a51678c89c88d53e071a42"
|
||||
git-tree-sha1 = "2c88339bcfa011089f7538f89c5be780d0b558bb"
|
||||
uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46"
|
||||
version = "0.4.4"
|
||||
version = "0.4.6"
|
||||
|
||||
[[Preferences]]
|
||||
deps = ["TOML"]
|
||||
|
|
@ -1972,16 +1990,16 @@ uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c"
|
|||
version = "0.6.11"
|
||||
|
||||
[[RecursiveArrayTools]]
|
||||
deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"]
|
||||
git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23"
|
||||
deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"]
|
||||
git-tree-sha1 = "53d040e68b5afff59a9eb1f692d9a08369b07f61"
|
||||
uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
|
||||
version = "2.32.3"
|
||||
version = "2.34.0"
|
||||
|
||||
[[RecursiveFactorization]]
|
||||
deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"]
|
||||
git-tree-sha1 = "0a2dfb3358fcde3676beb75405e782faa8c9aded"
|
||||
git-tree-sha1 = "2979cbb21580760431d2afb9b8f0f522899542f7"
|
||||
uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4"
|
||||
version = "0.2.12"
|
||||
version = "0.2.13"
|
||||
|
||||
[[Reexport]]
|
||||
git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b"
|
||||
|
|
@ -2075,9 +2093,9 @@ version = "0.3.3"
|
|||
|
||||
[[SciMLBase]]
|
||||
deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"]
|
||||
git-tree-sha1 = "6a5c8e335e82b0c674bf74f7b45f005175b0cc5f"
|
||||
git-tree-sha1 = "0f016d69ed6df4ec438e468986036a75493c3261"
|
||||
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
|
||||
version = "1.77.0"
|
||||
version = "1.79.0"
|
||||
|
||||
[[ScikitLearnBase]]
|
||||
deps = ["LinearAlgebra", "Random", "Statistics"]
|
||||
|
|
@ -2129,9 +2147,9 @@ version = "1.0.3"
|
|||
|
||||
[[SimpleNonlinearSolve]]
|
||||
deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "Reexport", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"]
|
||||
git-tree-sha1 = "7f3f0086731cb2eeb50b772389231dbc0b630ddb"
|
||||
git-tree-sha1 = "6f33c18fad7789a59aa4abbc6eb13a7cc85c21be"
|
||||
uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7"
|
||||
version = "0.1.2"
|
||||
version = "0.1.3"
|
||||
|
||||
[[SimpleTraits]]
|
||||
deps = ["InteractiveUtils", "MacroTools"]
|
||||
|
|
@ -2171,9 +2189,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
|
|||
|
||||
[[SparseDiffTools]]
|
||||
deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"]
|
||||
git-tree-sha1 = "472216c5af9f2f1fce02b760651fe024c75187bd"
|
||||
git-tree-sha1 = "4245283bee733122a9cb4545748d64e0c63337c0"
|
||||
uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804"
|
||||
version = "1.29.0"
|
||||
version = "1.30.0"
|
||||
|
||||
[[SpecialFunctions]]
|
||||
deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
|
||||
|
|
@ -2189,9 +2207,9 @@ version = "0.1.1"
|
|||
|
||||
[[Static]]
|
||||
deps = ["IfElse"]
|
||||
git-tree-sha1 = "0559586098f3cbd2e835461254ea2fcffa4a61ba"
|
||||
git-tree-sha1 = "c35b107b61e7f34fa3f124026f2a9be97dea9e1c"
|
||||
uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3"
|
||||
version = "0.8.2"
|
||||
version = "0.8.3"
|
||||
|
||||
[[StaticArrays]]
|
||||
deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"]
|
||||
|
|
@ -2222,9 +2240,9 @@ version = "0.33.21"
|
|||
|
||||
[[StatsFuns]]
|
||||
deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]
|
||||
git-tree-sha1 = "89a3bfe98f5400f4ff58bb5cd1a9e46f95d08352"
|
||||
git-tree-sha1 = "ab6083f09b3e617e34a956b43e9d51b824206932"
|
||||
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
|
||||
version = "1.1.0"
|
||||
version = "1.1.1"
|
||||
|
||||
[[StatsModels]]
|
||||
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"]
|
||||
|
|
@ -2240,9 +2258,9 @@ version = "0.15.4"
|
|||
|
||||
[[SteadyStateDiffEq]]
|
||||
deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"]
|
||||
git-tree-sha1 = "d06cb5c8f02490c85d46ec0ed303fd388941bd2e"
|
||||
git-tree-sha1 = "b15702821233f022b2c3ac1424069cbc590a7889"
|
||||
uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f"
|
||||
version = "1.9.1"
|
||||
version = "1.10.1"
|
||||
|
||||
[[StochasticDiffEq]]
|
||||
deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
|
||||
|
|
@ -2250,11 +2268,17 @@ git-tree-sha1 = "43c1149ff76d6f55396331c5a565adcd2ed70b3c"
|
|||
uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0"
|
||||
version = "6.57.3"
|
||||
|
||||
[[StrTables]]
|
||||
deps = ["Dates"]
|
||||
git-tree-sha1 = "5998faae8c6308acc25c25896562a1e66a3bb038"
|
||||
uuid = "9700d1a9-a7c8-5760-9816-a99fda30bb8f"
|
||||
version = "1.0.1"
|
||||
|
||||
[[StrideArraysCore]]
|
||||
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"]
|
||||
git-tree-sha1 = "0b1ea3e3fdf93b42e9c0f58347168618b6acc259"
|
||||
git-tree-sha1 = "8e91e5618bbca975312313c39ff827ea8f802fe3"
|
||||
uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da"
|
||||
version = "0.3.17"
|
||||
version = "0.4.4"
|
||||
|
||||
[[StringEncodings]]
|
||||
deps = ["Libiconv_jll"]
|
||||
|
|
@ -2273,10 +2297,10 @@ uuid = "354b36f9-a18e-4713-926e-db85100087ba"
|
|||
version = "1.0.3"
|
||||
|
||||
[[StructArrays]]
|
||||
deps = ["Adapt", "DataAPI", "StaticArraysCore", "Tables"]
|
||||
git-tree-sha1 = "13237798b407150a6d2e2bce5d793d7d9576e99e"
|
||||
deps = ["Adapt", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"]
|
||||
git-tree-sha1 = "b03a3b745aa49b566f128977a7dd1be8711c5e71"
|
||||
uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a"
|
||||
version = "0.6.13"
|
||||
version = "0.6.14"
|
||||
|
||||
[[StructTypes]]
|
||||
deps = ["Dates", "UUIDs"]
|
||||
|
|
@ -2300,9 +2324,9 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
|
|||
|
||||
[[Sundials]]
|
||||
deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "Sundials_jll"]
|
||||
git-tree-sha1 = "ec007bb878acd31cc25d74d139dff5a9693127a3"
|
||||
git-tree-sha1 = "3f8c27118d25ac5cfd36ec382c9c3a834c4d91ad"
|
||||
uuid = "c3572dad-4567-51f8-b174-8c6c989267f4"
|
||||
version = "4.11.1"
|
||||
version = "4.11.4"
|
||||
|
||||
[[Sundials_jll]]
|
||||
deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"]
|
||||
|
|
@ -2310,6 +2334,12 @@ git-tree-sha1 = "013ff4504fc1d475aa80c63b455b6b3a58767db2"
|
|||
uuid = "fb77eaff-e24c-56d4-86b1-d163f2edb164"
|
||||
version = "5.2.0+1"
|
||||
|
||||
[[SymbolicIndexingInterface]]
|
||||
deps = ["DocStringExtensions"]
|
||||
git-tree-sha1 = "6b764c160547240d868be4e961a5037f47ad7379"
|
||||
uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
|
||||
version = "0.2.1"
|
||||
|
||||
[[TOML]]
|
||||
deps = ["Dates"]
|
||||
uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
|
||||
|
|
@ -2349,10 +2379,10 @@ uuid = "62fd8b95-f654-4bbd-a8a5-9c27f68ccd50"
|
|||
version = "0.1.1"
|
||||
|
||||
[[Term]]
|
||||
deps = ["CodeTracking", "Dates", "Highlights", "InteractiveUtils", "Logging", "Markdown", "MyterialColors", "OrderedCollections", "Parameters", "ProgressLogging", "SnoopPrecompile", "Tables", "UUIDs", "UnicodeFun"]
|
||||
git-tree-sha1 = "eb5498a676b283594236e1e58a5f70f1f4e57ef6"
|
||||
deps = ["CodeTracking", "Dates", "Highlights", "InteractiveUtils", "Logging", "Markdown", "MyterialColors", "OrderedCollections", "Parameters", "ProgressLogging", "SnoopPrecompile", "Tables", "UUIDs", "Unicode", "UnicodeFun", "WordTokenizers"]
|
||||
git-tree-sha1 = "50d3093ef60cdbfabf8e10fc028b1a436717932b"
|
||||
uuid = "22787eb5-b846-44ae-b979-8e399b8463ab"
|
||||
version = "1.0.6"
|
||||
version = "1.1.0"
|
||||
|
||||
[[Test]]
|
||||
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
|
||||
|
|
@ -2389,9 +2419,9 @@ version = "0.3.1"
|
|||
|
||||
[[TranscodingStreams]]
|
||||
deps = ["Random", "Test"]
|
||||
git-tree-sha1 = "8a75929dcd3c38611db2f8d08546decb514fcadf"
|
||||
git-tree-sha1 = "e4bdc63f5c6d62e80eb1c0043fcc0360d5950ff7"
|
||||
uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
|
||||
version = "0.9.9"
|
||||
version = "0.9.10"
|
||||
|
||||
[[TreeViews]]
|
||||
deps = ["Test"]
|
||||
|
|
@ -2499,9 +2529,9 @@ version = "1.4.2"
|
|||
|
||||
[[WebIO]]
|
||||
deps = ["AssetRegistry", "Base64", "Distributed", "FunctionalCollections", "JSON", "Logging", "Observables", "Pkg", "Random", "Requires", "Sockets", "UUIDs", "WebSockets", "Widgets"]
|
||||
git-tree-sha1 = "55ea1b43214edb1f6a228105a219c6e84f1f5533"
|
||||
git-tree-sha1 = "976d0738247f155d0dcd77607edea644f069e1e9"
|
||||
uuid = "0f1e0344-ec1d-5b48-a673-e5cf874b6c29"
|
||||
version = "0.8.19"
|
||||
version = "0.8.20"
|
||||
|
||||
[[WebSockets]]
|
||||
deps = ["Base64", "Dates", "HTTP", "Logging", "Sockets"]
|
||||
|
|
@ -2527,6 +2557,17 @@ git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3"
|
|||
uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6"
|
||||
version = "0.5.5"
|
||||
|
||||
[[WordTokenizers]]
|
||||
deps = ["DataDeps", "HTML_Entities", "StrTables", "Unicode"]
|
||||
git-tree-sha1 = "01dd4068c638da2431269f49a5964bf42ff6c9d2"
|
||||
uuid = "796a5d58-b03d-544a-977e-18100b691f6e"
|
||||
version = "0.5.6"
|
||||
|
||||
[[WorkerUtilities]]
|
||||
git-tree-sha1 = "cd1659ba0d57b71a464a29e64dbc67cfe83d54e7"
|
||||
uuid = "76eceee3-57b5-4d4a-8e66-0e911cebbf60"
|
||||
version = "1.6.1"
|
||||
|
||||
[[XAM]]
|
||||
deps = ["Automa", "BGZFStreams", "BioAlignments", "BioGenerics", "BioSequences", "GenomicFeatures", "Indexes", "Printf", "TranscodingStreams"]
|
||||
git-tree-sha1 = "634c3177fdf7d52498d4b947080bc73be833eeab"
|
||||
|
|
@ -2553,9 +2594,9 @@ version = "1.1.34+0"
|
|||
|
||||
[[XZ_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
|
||||
git-tree-sha1 = "d1d49166bc58e698ab38804d7bde2aef43e4b594"
|
||||
git-tree-sha1 = "7928d348322698fb93d5c14b184fdc176c8afc82"
|
||||
uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800"
|
||||
version = "5.2.7+0"
|
||||
version = "5.2.9+0"
|
||||
|
||||
[[Xorg_libX11_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"]
|
||||
|
|
|
|||
Loading…
Reference in a new issue