21 lines
307 B
Text
21 lines
307 B
Text
|
process VIQUAS {
|
||
|
tag "${prefix}"
|
||
|
label 'process_high'
|
||
|
|
||
|
input:
|
||
|
tuple val(prefix), path(bam)
|
||
|
path(reference)
|
||
|
|
||
|
output:
|
||
|
tuple val(prefix), path("*.fa")
|
||
|
|
||
|
publishDir "results/viquas", mode: 'copy'
|
||
|
|
||
|
script:
|
||
|
"""
|
||
|
viquas \\
|
||
|
${reference} \\
|
||
|
${bam}
|
||
|
"""
|
||
|
}
|