feat: Add ViQuas to main pipeline
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1 changed files with 7 additions and 0 deletions
7
main.nf
7
main.nf
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@ -1,5 +1,7 @@
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#!/usr/bin/env nextflow
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#!/usr/bin/env nextflow
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include { VIQUAS } from './modules/viquas'
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workflow {
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workflow {
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Channel
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Channel
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@ -58,6 +60,11 @@ workflow {
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ch_all_haplotypes,
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ch_all_haplotypes,
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ch_reference
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ch_reference
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)
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)
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VIQUAS(
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ch_alignments,
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ch_reference
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)
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}
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}
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process EFETCH {
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process EFETCH {
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